RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 INPP5KQ9BT40 448 aa22.07■■□□□ 1.12
TSEN54-201ENST00000333213 ATXN7L1Q9ULK2 861 aaPredicted RBP22.07■■□□□ 1.12
TSEN54-201ENST00000333213 PRPF19Q9UMS4 504 aaKnown RBP22.07■■□□□ 1.12
TSEN54-201ENST00000333213 ASB4Q9Y574 426 aa22.07■■□□□ 1.12
TSEN54-201ENST00000333213 SCN3AQ9NY46 2000 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 DNAJB6O75190 326 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 SCELO95171 688 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 MTTPP55157 894 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 CEACAM7Q14002 265 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 PIGGQ5H8A4 983 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 CPTPQ5TA50 214 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 LAIR1Q6GTX8 287 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 FAM180BQ6P0A1 224 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 BNC2Q6ZN30 1099 aaPredicted RBP22.06■■□□□ 1.12
TSEN54-201ENST00000333213 ZNF574Q6ZN55 896 aaPredicted RBP22.06■■□□□ 1.12
TSEN54-201ENST00000333213 IKBIPQ70UQ0 350 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 ZCCHC7Q8N3Z6 543 aaKnown RBP22.06■■□□□ 1.12
TSEN54-201ENST00000333213 DNAJB14Q8TBM8 379 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 GBP5Q96PP8 586 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 KLHL4Q9C0H6 718 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 VAPAQ9P0L0 249 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 SH3BP4Q9P0V3 963 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 SEMA5BQ9P283 1151 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 CROCCQ5TZA2 2017 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 ENO4A6NNW6 628 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 ZBTB11O95625 1053 aaPredicted RBP22.06■■□□□ 1.12
TSEN54-201ENST00000333213 FAM58BPP0C7Q3 252 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 CKMT1AP12532 417 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 EFNA1P20827 205 aaPredicted RBP22.06■■□□□ 1.12
TSEN54-201ENST00000333213 PTPN6P29350 595 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 HPCAL1P37235 193 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 CDKN2CP42773 168 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 TSFMP43897 325 aaKnown RBP22.06■■□□□ 1.12
TSEN54-201ENST00000333213 ATXN3P54252 364 aaPredicted RBP22.06■■□□□ 1.12
TSEN54-201ENST00000333213 KCNAB1Q14722 419 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 DEFB134Q4QY38 66 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 ZC3H12BQ5HYM0 836 aaKnown RBP22.06■■□□□ 1.12
TSEN54-201ENST00000333213 SNAP47Q5SQN1 464 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 RNF220Q5VTB9 566 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 MSRB3Q8IXL7 192 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 BTBD9Q96Q07 612 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 DUSP26Q9BV47 211 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 CHRNA10Q9GZZ6 450 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 RXFP3Q9NSD7 469 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 GID8Q9NWU2 228 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 SLC25A37Q9NYZ2 338 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 TMEM181Q9P2C4 612 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 POMPQ9Y244 141 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 MAN2B2Q9Y2E5 1009 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 ATG4BQ9Y4P1 393 aa22.06■■□□□ 1.12
TSEN54-201ENST00000333213 WASHC1A8K0Z3 465 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 ZSCAN9O15535 394 aaPredicted RBP22.05■■□□□ 1.12
TSEN54-201ENST00000333213 PRKRAO75569 313 aaKnown RBP22.05■■□□□ 1.12
TSEN54-201ENST00000333213 SEPHS1P49903 392 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 CCL7P80098 99 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 TCF15Q12870 199 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 SF3A2Q15428 464 aaKnown RBP22.05■■□□□ 1.12
TSEN54-201ENST00000333213 GTDC1Q4AE62 458 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 MANEAQ5SRI9 462 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 C6orf10Q5SRN2 563 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 TICAM1Q8IUC6 712 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 TMEM126BQ8IUX1 230 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 SLC15A3Q8IY34 581 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 CLECL1Q8IZS7 167 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 STARD8Q92502 1023 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 HOPXQ9BPY8 73 aaPredicted RBP22.05■■□□□ 1.12
TSEN54-201ENST00000333213 PAIP1Q9H074 479 aaKnown RBP22.05■■□□□ 1.12
TSEN54-201ENST00000333213 SOHLH2Q9NX45 425 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 C5AR2Q9P296 337 aa22.05■■□□□ 1.12
TSEN54-201ENST00000333213 GMPR2Q9P2T1 348 aaKnown RBP22.05■■□□□ 1.12
TSEN54-201ENST00000333213 MED26O95402 600 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 ZNF883P0CG24 379 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 HOXB9P17482 250 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-201ENST00000333213 DDCP20711 480 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 MLLT3P42568 568 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-201ENST00000333213 SLC7A2P52569 658 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 SQSTM1Q13501 440 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 SLC9A5Q14940 896 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 DNAJC14Q6Y2X3 702 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-201ENST00000333213 PRR23CQ6ZRP0 262 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 DTWD1Q8N5C7 304 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 CIDECQ96AQ7 238 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-201ENST00000333213 ZNF285Q96NJ3 590 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 PDE7BQ9NP56 450 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 SPAG4Q9NPE6 437 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 DNAAF2Q9NVR5 837 aaKnown RBP22.04■■□□□ 1.12
TSEN54-201ENST00000333213 CMTM6Q9NX76 183 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 ABCD2Q9UBJ2 740 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 PCDHA9Q9Y5H5 950 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 TRBV5-3A0A0A0MS03 114 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 A0A1W2PR48 441 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 PRORSD1PA6NEY8 169 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 A8MU76 341 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 NME4O00746 187 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 CDX4O14627 284 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-201ENST00000333213 SRPX2O60687 465 aaPredicted RBP22.04■■□□□ 1.12
TSEN54-201ENST00000333213 NPPAP01160 153 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 C1QCP02747 245 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 UQCRBP14927 111 aa22.04■■□□□ 1.12
TSEN54-201ENST00000333213 MSX2P35548 267 aaPredicted RBP22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms