RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 TIMP2P16035 220 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 CTSCP53634 463 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 EIF4HQ15056 248 aaKnown RBP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 BTN2A1Q7KYR7 527 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 PARS2Q7L3T8 475 aaKnown RBP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 C6orf120Q7Z4R8 191 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF527Q8NB42 609 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 TRMT2BQ96GJ1 504 aaKnown RBP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 WDR83Q9BRX9 315 aaKnown RBP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 KCNN2Q9H2S1 579 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 DNMT3BQ9UBC3 853 aaKnown RBP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 TNFRSF10DQ9UBN6 386 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 ACOX3O15254 700 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 MAGEB3O15480 346 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 C8BP07358 591 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 MNDAP41218 407 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 COMMD6Q7Z4G1 85 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 TMEM126BQ8IUX1 230 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 MRPL43Q8N983 215 aaKnown RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 SH3YL1Q96HL8 342 aaPredicted RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 TPSD1Q9BZJ3 242 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 Q9N2J8 555 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 TUBGCP6Q96RT7 1819 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 BLOC1S5-TXNDC5H3BN57 136 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 KLKB1P03952 638 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 FGF4P08620 206 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 RPS17P08708 135 aaKnown RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 PDHA2P29803 388 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 NTSR1P30989 418 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 GABRA3P34903 492 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 MAGEA3P43357 314 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 RAB39AQ14964 217 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 SLC22A15Q8IZD6 547 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 PROKR2Q8NFJ6 384 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 ZFP3Q96NJ6 502 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 MCHR1Q99705 422 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 MACROD1Q9BQ69 325 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 BHLHE41Q9C0J9 482 aaPredicted RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 LYARQ9NX58 379 aaKnown RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 J3QLW9 94 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF19P17023 458 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 GSTM3P21266 225 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 C5AR1P21730 350 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 CSTF1Q05048 431 aaKnown RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 RPS26P11Q5JNZ5 115 aaPredicted RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 ARL9Q6T311 187 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 SLC29A4Q7RTT9 530 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 FAM83CQ9BQN1 747 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 ARNT2Q9HBZ2 717 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 A0A1B0GVT2 93 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 KLHL18O94889 574 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 FESP07332 822 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 IFI30P13284 250 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 ADAM17P78536 824 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF551Q7Z340 670 aaPredicted RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 RAB43Q86YS6 212 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 TGM7Q96PF1 710 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 SLC30A3Q99726 388 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 MND1Q9BWT6 205 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 OR8D2Q9GZM6 311 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 KATNBL1Q9H079 304 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 BRD7Q9NPI1 651 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 ERVK-18Q9QC07 812 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 PIAS3Q9Y6X2 628 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 COL5A3P25940 1745 aaPredicted RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 OR52A4PA6NMU1 304 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 PRMT3O60678 531 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 INMTO95050 263 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 CKMT1AP12532 417 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 HSD3B1P14060 373 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 HSD3B2P26439 372 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 OXTRP30559 389 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 NRG3P56975 720 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 PUM1Q14671 1186 aaKnown RBP eCLIP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 PTGES3Q15185 160 aaKnown RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 TMEM236Q5W0B7 351 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 TRIM73Q86UV7 250 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 MARCH9Q86YJ5 346 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 SLC35C2Q9NQQ7 365 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 SDR39U1Q9NRG7 319 aaPredicted RBP12.47□□□□□ -0.41
VSTM4-202ENST00000332853 ALKBH4Q9NXW9 302 aa12.47□□□□□ -0.41
VSTM4-202ENST00000332853 MROH6A6NGR9 719 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF821O75541 412 aaPredicted RBP12.46□□□□□ -0.41
VSTM4-202ENST00000332853 ITGBL1O95965 494 aaPredicted RBP12.46□□□□□ -0.41
VSTM4-202ENST00000332853 MC1RQ01726 317 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 RPL6Q02878 288 aaKnown RBP12.46□□□□□ -0.41
VSTM4-202ENST00000332853 ODF4Q2M2E3 257 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 GRHL2Q6ISB3 625 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 LARP4Q71RC2 724 aaKnown RBP eCLIP12.46□□□□□ -0.41
VSTM4-202ENST00000332853 NUP54Q7Z3B4 507 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 NEIL2Q969S2 332 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 CRELD1Q96HD1 420 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 SHANK3Q9BYB0 1731 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 SAGE2PA6NJ88 616 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 MITFO75030 526 aaPredicted RBP12.46□□□□□ -0.41
VSTM4-202ENST00000332853 RENP00797 406 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 C1SP09871 688 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF823P16415 610 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 BMP8BP34820 402 aa12.46□□□□□ -0.41
VSTM4-202ENST00000332853 SOX9P48436 509 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms