RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CLCNKAP51800 687 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ZNF136P52737 540 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 TAF1AQ15573 450 aaPredicted RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 KIAA1614Q5VZ46 1190 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 SLC29A4Q7RTT9 530 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 C1orf127Q8N9H9 656 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 OR4E2Q8NGC2 313 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 SLC16A10Q8TF71 515 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 OSTF1Q92882 214 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 SCRN2Q96FV2 425 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ELF4Q99607 663 aaPredicted RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 GPR20Q99678 358 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CALML5Q9NZT1 146 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CNTN3Q9P232 1028 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 NUFIP1Q9UHK0 495 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 PCYT1BQ9Y5K3 369 aaPredicted RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 DLGAP1O14490 977 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 HCAR3P49019 387 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 RNF4P78317 190 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ST3GAL4Q11206 333 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 DEFB115Q30KQ5 88 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 RABL3Q5HYI8 236 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ZNF527Q8NB42 609 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 RGMAQ96B86 450 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 MMP28Q9H239 520 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 THUMPD1Q9NXG2 353 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 A0A1W2PRU2 124 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 GXYLT2A0PJZ3 443 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 HSBP1L1C9JCN9 74 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 AMY2BP19961 511 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 S100PP25815 95 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 MEF2AQ02078 507 aaPredicted RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 MEX3DQ86XN8 651 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 LHX5Q9H2C1 402 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 WDR26Q9H7D7 661 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 IGSF9Q9P2J2 1179 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 OR6C65A6NJZ3 312 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 POM121CA8CG34 1229 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 GMDSO60547 372 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 IFNA10P01566 189 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CHRNA1P02708 482 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 IFNA4P05014 189 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ERP29P30040 261 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 OR1E2P47887 323 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 LSAMPQ13449 338 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 BCL2L15Q5TBC7 163 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 SLC24A5Q71RS6 500 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 PIWIL3Q7Z3Z3 882 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 LRRC52Q8N7C0 313 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 TXNDC5Q8NBS9 432 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 FAM83CQ9BQN1 747 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 GNG13Q9P2W3 67 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 FZD10Q9ULW2 581 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 NBASA2RRP1 2371 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 MIA3Q5JRA6 1907 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 C8AP07357 584 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ZNF41P51814 821 aaPredicted RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 FGL1Q08830 312 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 FGFBP1Q14512 234 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 ZNF701Q9NV72 531 aaPredicted RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 AQP12BA6NM10 295 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 YJEFN3A6XGL0 299 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 TPPPO94811 219 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CFL1P23528 166 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 HTR2AP28223 471 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CDK10Q15131 360 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 OR4F3Q6IEY1 312 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CERS6Q6ZMG9 384 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 AQP12AQ8IXF9 295 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 FAM83FQ8NEG4 500 aaPredicted RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 SPPL2BQ8TCT7 592 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 SCLYQ96I15 445 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 REV1Q9UBZ9 1251 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 IL36AQ9UHA7 158 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 LSM5Q9Y4Y9 91 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 PCDHGB1Q9Y5G3 927 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 PTGDR2Q9Y5Y4 395 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 C11orf98E9PRG8 122 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 SMLR1H3BR10 107 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 MMP20O60882 483 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 LEPRP48357 1165 aaKnown RBP7.63□□□□□ -1.19
CIITA-201ENST00000324288 JAM2P57087 298 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CLRN1P58418 232 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CHRFAM7AQ494W8 412 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 TDRPQ86YL5 185 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 TCTEX1D2Q8WW35 142 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 CAMK1GQ96NX5 476 aa7.63□□□□□ -1.19
CIITA-201ENST00000324288 NACAE9PAV3 2078 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CYP3A7-CYP3A51PA0A087WV96 503 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 A0A1B0GVI7 797 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 ZNF860A6NHJ4 632 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 RNF13O43567 381 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CAPNS1P04632 268 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 CYP3A7P24462 503 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 HOXD12P35452 270 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 MVKQ03426 396 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 NTRK2Q16620 822 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 C6orf141Q5SZD1 244 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 HSD17B14Q9BPX1 270 aa7.62□□□□□ -1.19
CIITA-201ENST00000324288 NUSAP1Q9BXS6 441 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms