RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CREG1O75629 220 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 C9P02748 559 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 GPIP06744 558 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 ZNF888P0CJ79 500 aaPredicted RBP17.48■□□□□ 0.39
USP39-201ENST00000323701 C18orf63Q68DL7 685 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 ERMP1Q7Z2K6 904 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 ASPGQ86U10 573 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 SERPINA11Q86U17 422 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 BAHD1Q8TBE0 780 aaPredicted RBP17.48■□□□□ 0.39
USP39-201ENST00000323701 CXorf36Q9H7Y0 433 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 FAM60AQ9NP50 221 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 AGPAT4Q9NRZ5 378 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 TAS2R9Q9NYW1 312 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 CACNA1EQ15878 2313 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 ASXL3Q9C0F0 2248 aa17.48■□□□□ 0.39
USP39-201ENST00000323701 A0A1B0GVT2 93 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 VILLO15195 856 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 RPL3P39023 403 aaKnown RBP17.47■□□□□ 0.39
USP39-201ENST00000323701 PCBP4P57723 403 aaKnown RBP17.47■□□□□ 0.39
USP39-201ENST00000323701 HEPACAMQ14CZ8 416 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 RGNQ15493 299 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 SLC5A12Q1EHB4 618 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 ZNF750Q32MQ0 723 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 TBC1D19Q8N5T2 526 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 GOLM1Q8NBJ4 401 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 PAPD5Q8NDF8 572 aaKnown RBP17.47■□□□□ 0.39
USP39-201ENST00000323701 UTP15Q8TED0 518 aaKnown RBP17.47■□□□□ 0.39
USP39-201ENST00000323701 RNF145Q96MT1 663 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 SLC35A5Q9BS91 424 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 RAPGEFL1Q9UHV5 662 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 FBXW2Q9UKT8 454 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 ENTPD2Q9Y5L3 495 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 SPTBP11277 2137 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 FAM221BA6H8Z2 402 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 ST6GAL1P15907 406 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 CKMT2P17540 419 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 GSTM2P28161 218 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 FASLGP48023 281 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 BTN3A2P78410 334 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 TRIM40Q6P9F5 258 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 GKN2Q86XP6 184 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 ZCCHC10Q8TBK6 192 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 NCLNQ969V3 563 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 SLC29A1Q99808 456 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 CIB1Q99828 191 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 MAPKAP1Q9BPZ7 522 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 DOLKQ9UPQ8 538 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 DTNAQ9Y4J8 743 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 KLK4Q9Y5K2 254 aa17.47■□□□□ 0.39
USP39-201ENST00000323701 ARID1BQ8NFD5 2236 aaPredicted RBP17.47■□□□□ 0.39
USP39-201ENST00000323701 A0A0J9YY10 115 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 LMO7DNF2Z398 122 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 H0YGG7 62 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 CASC3O15234 703 aaKnown RBP17.46■□□□□ 0.39
USP39-201ENST00000323701 PEX1O43933 1283 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 B4GALT2O60909 372 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 PRKD3O94806 890 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 TDGF1P13385 188 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 ETFAP13804 333 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 IL10P22301 178 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 AFF3P51826 1226 aaKnown RBP17.46■□□□□ 0.39
USP39-201ENST00000323701 ARF3P61204 181 aaPredicted RBP17.46■□□□□ 0.39
USP39-201ENST00000323701 BNC1Q01954 994 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 BNIP3Q12983 259 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 SLC9A5Q14940 896 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 IRAK1BP1Q5VVH5 260 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 PRSS41Q7RTY9 318 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 GALNT4Q8N4A0 578 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 NT5CQ8TCD5 201 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 FAM162AQ96A26 154 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 ZFYVE21Q9BQ24 234 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 CHID1Q9BWS9 393 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 IL21RQ9HBE5 538 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 STARD5Q9NSY2 213 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 ZNF282Q9UDV7 671 aaPredicted RBP17.46■□□□□ 0.39
USP39-201ENST00000323701 POMT2Q9UKY4 750 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 PCDHGA2Q9Y5H1 932 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 TBX19O60806 448 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 PIAS2O75928 621 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 UBXN7O94888 489 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 AIFM1O95831 613 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 SERPINA1P01009 418 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 EIF2S1P05198 315 aaKnown RBP17.46■□□□□ 0.39
USP39-201ENST00000323701 ZNF26P17031 533 aaPredicted RBP17.46■□□□□ 0.39
USP39-201ENST00000323701 CRYBA2P53672 197 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 HNRNPKP61978 463 aaKnown RBP eCLIP17.46■□□□□ 0.39
USP39-201ENST00000323701 DUSP2Q05923 314 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 VMACQ2NL98 169 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 DEFB110Q30KQ9 67 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 ANGPTL8Q6UXH0 198 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 OOSP2Q86WS3 158 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 C17orf82Q86X59 251 aaPredicted RBP17.46■□□□□ 0.39
USP39-201ENST00000323701 EPHX4Q8IUS5 362 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 MAML2Q8IZL2 1156 aaPredicted RBP17.46■□□□□ 0.39
USP39-201ENST00000323701 ICA1LQ8NDH6 482 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 EFHD1Q9BUP0 239 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 COQ10BQ9H8M1 238 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 DCAF13Q9NV06 445 aaKnown RBP17.46■□□□□ 0.39
USP39-201ENST00000323701 AP3M1Q9Y2T2 418 aa17.46■□□□□ 0.39
USP39-201ENST00000323701 WBP11Q9Y2W2 641 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms