RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 SNX7Q9UNH6 387 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 MRPS33Q9Y291 106 aaKnown RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 C1orf105O95561 183 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 SMIM18P0DKX4 95 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 OR12D1P0DN82 309 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 GSTM2P28161 218 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 IMPA1P29218 277 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF155Q12901 538 aaPredicted RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 HLA-DQA1Q5Y7H0 255 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 Q6ZNB5 142 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 C6orf120Q7Z4R8 191 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 FAM86B1Q8N7N1 296 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 L3MBTL4Q8NA19 623 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 WDR48Q8TAF3 677 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 FAR1Q8WVX9 515 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 PIP5K1AQ99755 562 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 IL1RAPQ9NPH3 570 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 TBX21Q9UL17 535 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 ABCG2Q9UNQ0 655 aa12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 RPL36Q9Y3U8 105 aaKnown RBP12.85□□□□□ -0.35
PCDHB9-201ENST00000316105 A0A1B0GVG6 124 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 TBX1O43435 398 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 VNN2O95498 520 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 SLC5A2P31639 672 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 ARPC4P59998 168 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF311Q5JNZ3 666 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 VN1R5Q7Z5H4 357 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 FAM20CQ8IXL6 584 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 AASSQ9UDR5 926 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 BTNL2Q9UIR0 455 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 SRCAPQ6ZRS2 3230 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 CASKO14936 926 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 ALOX5P09917 674 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 TFPTP0C1Z6 253 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 PRG2P13727 222 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 AZGP1P25311 298 aaKnown RBP12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 NDUFS1P28331 727 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 RYKP34925 604 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 FCHO2Q0JRZ9 810 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 NFATC3Q12968 1075 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 CARTPTQ16568 116 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 CCSMST1Q4G0I0 132 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 USP43Q70EL4 1123 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 LAPTM4BQ86VI4 370 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 METTL25Q8N6Q8 603 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 HMGB4Q8WW32 186 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 PPP1R14BQ96C90 147 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 FZD3Q9NPG1 666 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 DNAJC27Q9NZQ0 273 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 PTPRFP10586 1907 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 ANKRD33BA6NCL7 494 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 H3BMQ9 156 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 RPS21P63220 83 aaKnown RBP12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 VEZF1Q14119 521 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 COLEC12Q5KU26 742 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 KHDRBS2Q5VWX1 349 aaKnown RBP12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 KLHDC8BQ8IXV7 354 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 SLC5A8Q8N695 610 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 COX18Q8N8Q8 333 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 C9orf43Q8TAL5 461 aaPredicted RBP12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 UBASH3BQ8TF42 649 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 COG8Q96MW5 612 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 KCNS3Q9BQ31 491 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 DPH7Q9BTV6 452 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 STON1Q9Y6Q2 735 aa12.84□□□□□ -0.35
PCDHB9-201ENST00000316105 A0A1B0GTW7 788 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 TMEM202A6NGA9 273 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 AP1G1O43747 822 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 GPR37L1O60883 481 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 NUDT7P0C024 238 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 AKT2P31751 481 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 SHMT2P34897 504 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 POLR2IP36954 125 aaKnown RBP12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 GABARAPL2P60520 117 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 ST3GAL4Q11206 333 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 CDK5R2Q13319 367 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 BORAQ6PGQ7 559 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 SAMD14Q8IZD0 417 aaPredicted RBP12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 MRPL48Q96GC5 212 aaKnown RBP12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 LMAN2LQ9H0V9 348 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 PRDM8Q9NQV8 689 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 CLDND1Q9NY35 253 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 ZNF225Q9UK10 706 aa12.83□□□□□ -0.35
PCDHB9-201ENST00000316105 SCN4AP35499 1836 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 IRGMA1A4Y4 181 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 GPR68Q15743 365 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 FOXB2Q5VYV0 432 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 SMARCD3Q6STE5 483 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 GPR151Q8TDV0 419 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 FGF13Q92913 245 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 LYSMD1Q96S90 227 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 SERHL2Q9H4I8 314 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 SERHLQ9NQF3 203 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 MS4A12Q9NXJ0 267 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 RNF6Q9Y252 685 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 DUXAA6NLW8 204 aa12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 TLX2O43763 284 aaPredicted RBP12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 PIM1P11309 404 aaPredicted RBP12.83□□□□□ -0.36
PCDHB9-201ENST00000316105 MMP12P39900 470 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms