RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TSPAN5P62079 268 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 VLDLRP98155 873 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 NFATC3Q12968 1075 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 SLC35F1Q5T1Q4 408 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 FATE1Q969F0 183 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 SCRN2Q96FV2 425 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 FRMD6Q96NE9 622 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 IL17FQ96PD4 163 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 FEVQ99581 238 aa13.24□□□□□ -0.29
SPAST-201ENST00000315285 ADAMTSL3P82987 1691 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 EIF3FO00303 357 aaPredicted RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 TSPAN9O75954 239 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 RPP14O95059 124 aaKnown RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 CXCR1P25024 350 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 CRISP1P54107 249 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 LRP8Q14114 963 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 ZNF613Q6PF04 617 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 PIANPQ8IYJ0 282 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 OR8J1Q8NGP2 316 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 HAVCR1Q96D42 359 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 TEX28O15482 410 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 LAMP1P11279 417 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 RHCEP18577 417 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 RPS3P23396 243 aaKnown RBP eCLIP13.23□□□□□ -0.29
SPAST-201ENST00000315285 CD70P32970 193 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 RCAN2Q14206 197 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 RAB41Q5JT25 222 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 CLLU1OSQ5K130 101 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 CRTC1Q6UUV9 634 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 TMIGD2Q96BF3 282 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 ZNF689Q96CS4 500 aaPredicted RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 SLC12A9Q9BXP2 914 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 DPAGT1Q9H3H5 408 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 ARNT2Q9HBZ2 717 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 CSNK1G1Q9HCP0 422 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 IL26Q9NPH9 171 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 IFT46Q9NQC8 304 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 TMEM45AQ9NWC5 275 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 LYARQ9NX58 379 aaKnown RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 ACSL6Q9UKU0 697 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 TCRBV5S1A1TA0A578 114 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 CYBAP13498 195 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 MAP3K8P41279 467 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 MC1RQ01726 317 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 LIPKQ5VXJ0 399 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 UGT2A3Q6UWM9 527 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 QSOX2Q6ZRP7 698 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 OR8H3Q8N146 312 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 RHBDF1Q96CC6 855 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 POLE4Q9NR33 117 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 TMEM5Q9Y2B1 443 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 A8MUA0 341 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 TTC34A8MYJ7 566 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 MITFO75030 526 aaPredicted RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 PAK4O96013 591 aaPredicted RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 RETP07949 1114 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 ETFAP13804 333 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 CELP19835 753 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 PTNP21246 168 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 PRDX3P30048 256 aaKnown RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 CCKBRP32239 447 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 MLLT10P55197 1068 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 FAM189BP81408 668 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 CDKL1Q00532 357 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 CD47Q08722 323 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 SMU1Q2TAY7 513 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 MORN1Q5T089 497 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 PPP2R2DQ66LE6 453 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 TSPYL5Q86VY4 417 aaPredicted RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 OR13J1Q8NGT2 312 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 SORCS1Q8WY21 1168 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 APIPQ96GX9 242 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 ADAD1Q96M93 576 aaKnown RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 F2RL3Q96RI0 385 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 PHOX2BQ99453 314 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 RC3H2Q9HBD1 1191 aaKnown RBP13.23□□□□□ -0.29
SPAST-201ENST00000315285 GMEB1Q9Y692 573 aa13.23□□□□□ -0.29
SPAST-201ENST00000315285 C2orf92A0A1B0GVN3 265 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 PROM1O43490 865 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 TNFP01375 233 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 MT-ND5P03915 603 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 S100A9P06702 114 aaKnown RBP13.22□□□□□ -0.29
SPAST-201ENST00000315285 ASGR2P07307 311 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 HOXB2P14652 356 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 OXTRP30559 389 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 RPS26P62854 115 aaKnown RBP13.22□□□□□ -0.29
SPAST-201ENST00000315285 ID2Q02363 134 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 CTC1Q2NKJ3 1217 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 PGBD2Q6P3X8 592 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 ADGRG5Q8IZF4 528 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 OR51G2Q8NGK0 314 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 NETO1Q8TDF5 533 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 A0A0X1KG70 313 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 A0A1W2PRG6 482 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 PPP6CO00743 305 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 NXPE4Q6UWF7 544 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 C6orf120Q7Z4R8 191 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 GALNTL5Q7Z4T8 443 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 OR4K14Q8NGD5 310 aa13.22□□□□□ -0.29
SPAST-201ENST00000315285 FRS2Q8WU20 508 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms