RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 PHOX2BQ99453 314 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 EFCAB11Q9BUY7 163 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 ZDHHC6Q9H6R6 413 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 HHATLQ9HCP6 504 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 TAS2R16Q9NYV7 291 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 NDOR1Q9UHB4 597 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 SLC25A13Q9UJS0 675 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 KCND3Q9UK17 655 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 SNX7Q9UNH6 387 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 HS3ST2Q9Y278 367 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 CMAHPQ9Y471 501 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 DSPPQ9NZW4 1301 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 KIF26AQ9ULI4 1882 aaPredicted RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 FAM25AB3EWG3 89 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 FAM25CB3EWG5 89 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 FAM25GB3EWG6 89 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 CACNB4O00305 520 aaPredicted RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 EFEMP2O95967 443 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 FURINP09958 794 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 POU1F1P28069 291 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 RPS19P39019 145 aaKnown RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 SMIM11AP58511 58 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 PSPHP78330 225 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 C2orf80Q0P641 193 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 ILKQ13418 452 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 CAMK2BQ13554 666 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 CDK10Q15131 360 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 ZNF385BQ569K4 471 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 REEP3Q6NUK4 255 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 CASP12Q6UXS9 341 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 RFLNAQ6ZTI6 216 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 IKBIPQ70UQ0 350 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 HTR3DQ70Z44 454 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 OR4K1Q8NGD4 311 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.24□□□□□ -0.29
MKS1-201ENST00000313863 TRIM63Q969Q1 353 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 TP53INP1Q96A56 240 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 TEFMQ96QE5 360 aaKnown RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 RC3H2Q9HBD1 1191 aaKnown RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 NDUFB11Q9NX14 153 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 RAB23Q9ULC3 237 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 LSM2Q9Y333 95 aaKnown RBP13.24□□□□□ -0.29
MKS1-201ENST00000313863 DYRK1BQ9Y463 629 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 MAP4K5Q9Y4K4 846 aa13.24□□□□□ -0.29
MKS1-201ENST00000313863 PRAMEF33A0A0G2JMD5 474 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 HYKKA2RU49 373 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 ANKRD34BA5PLL1 514 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 CCDC182A6NF36 153 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 PRAMEF25A6NGN4 478 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 J3KTA2 159 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 BNIP3LO60238 219 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 PRAMEF10O60809 474 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 ATG13O75143 517 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 ENTPD6O75354 484 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 PDE9AO76083 593 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 GASTP01350 101 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 DDX5P17844 614 aaKnown RBP13.23□□□□□ -0.29
MKS1-201ENST00000313863 ITGB7P26010 798 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 CD70P32970 193 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 DSTNP60981 165 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 SREBF2Q12772 1141 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 MLLT11Q13015 90 aaPredicted RBP13.23□□□□□ -0.29
MKS1-201ENST00000313863 ASAH1Q13510 395 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 ZNF770Q6IQ21 691 aaPredicted RBP13.23□□□□□ -0.29
MKS1-201ENST00000313863 XKRXQ6PP77 449 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 ZNF852Q6ZMS4 543 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 SLCO4C1Q6ZQN7 724 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 COMMD6Q7Z4G1 85 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 TMEM150AQ86TG1 271 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 SLC34A3Q8N130 599 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 TRAM1L1Q8N609 369 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 PROKR2Q8NFJ6 384 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 ASB15Q8WXK1 588 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 PPP1R16AQ96I34 528 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 OR4K3Q96R72 315 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 SLC22A12Q96S37 553 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 SLA2Q9H6Q3 261 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 NFKBIL1Q9UBC1 381 aaPredicted RBP13.23□□□□□ -0.29
MKS1-201ENST00000313863 MBD1Q9UIS9 605 aaPredicted RBP13.23□□□□□ -0.29
MKS1-201ENST00000313863 EXO1Q9UQ84 846 aaKnown RBP13.23□□□□□ -0.29
MKS1-201ENST00000313863 V9GYH0 126 aa13.23□□□□□ -0.29
MKS1-201ENST00000313863 DOCK6Q96HP0 2047 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 A0A1W2PRB8 838 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 C5orf58C9J3I9 102 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 M0R129 80 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 FAAHO00519 579 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 MYL12BO14950 172 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 SCO2O43819 266 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 LGI1O95970 557 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 IL1AP01583 271 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 IL7P13232 177 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 UQCRC2P22695 453 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 IMPA1P29218 277 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 VIPR1P32241 457 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 SOAT1P35610 550 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 BNC1Q01954 994 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 PRKCZQ05513 592 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 GANABQ14697 944 aaKnown RBP13.22□□□□□ -0.29
MKS1-201ENST00000313863 BRAT1Q6PJG6 821 aa13.22□□□□□ -0.29
MKS1-201ENST00000313863 GALNT12Q8IXK2 581 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms