RNA–Protein interactions for RNA: ENST00000311008.15

SPNS1-201, Transcript of sphingolipid transporter 1 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS1, Length 2,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-201ENST00000311008 ACER3Q9NUN7 267 aa18.68■□□□□ 0.58
SPNS1-201ENST00000311008 TDRKHQ9Y2W6 561 aaKnown RBP18.68■□□□□ 0.58
SPNS1-201ENST00000311008 AXIN1O15169 862 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 IFNW1P05000 195 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 TGFBR2P37173 567 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 LIMS1P48059 325 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 SLC6A11P48066 632 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 ZNF234Q14588 700 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 HEPACAMQ14CZ8 416 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 KHDRBS2Q5VWX1 349 aaKnown RBP18.67■□□□□ 0.58
SPNS1-201ENST00000311008 OR5AR1Q8NGP9 310 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 OR6Q1Q8NGQ2 317 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 OR52J3Q8NH60 311 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 NEURL3Q96EH8 262 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 NEUROD4Q9HD90 331 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 CXXC1Q9P0U4 656 aaPredicted RBP18.67■□□□□ 0.58
SPNS1-201ENST00000311008 RAB23Q9ULC3 237 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 ZNF451Q9Y4E5 1061 aa18.67■□□□□ 0.58
SPNS1-201ENST00000311008 PRRC2BQ5JSZ5 2229 aaKnown RBP18.67■□□□□ 0.58
SPNS1-201ENST00000311008 MPZL2O60487 215 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 CCNB2O95067 398 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 GADD45GO95257 159 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 LCKP06239 509 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 UGT2B10P36537 528 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 MAPK12P53778 367 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 ATP1A4Q13733 1029 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 LMNTD1Q8N9Z9 388 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 RSPRY1Q96DX4 576 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 ZNF764Q96H86 408 aaPredicted RBP18.66■□□□□ 0.58
SPNS1-201ENST00000311008 IL17FQ96PD4 163 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 NT5DC2Q9H857 520 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 WASH6PQ9NQA3 447 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 IMPAD1Q9NX62 359 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 LRRK1Q38SD2 2015 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 TRBC2A0A5B9 178 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 PRAMEF25A6NGN4 478 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 EFCAB9A8MZ26 197 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 CAPN5O15484 640 aaPredicted RBP18.66■□□□□ 0.58
SPNS1-201ENST00000311008 IDH2P48735 452 aaKnown RBP18.66■□□□□ 0.58
SPNS1-201ENST00000311008 LSM3P62310 102 aaKnown RBP18.66■□□□□ 0.58
SPNS1-201ENST00000311008 FAM92BQ6ZTR7 304 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 LRRTM4Q86VH4 590 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 OR5K2Q8NHB8 316 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 GGHQ92820 318 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 ZHX1-C8orf76Q96EF9 292 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 NIPSNAP1Q9BPW8 284 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 MS4A8Q9BY19 250 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 A4GALTQ9NPC4 353 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 RLIMQ9NVW2 624 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 SH3GLB1Q9Y371 365 aa18.66■□□□□ 0.58
SPNS1-201ENST00000311008 NUP210Q8TEM1 1887 aaPredicted RBP18.66■□□□□ 0.58
SPNS1-201ENST00000311008 PRAMEF33A0A0G2JMD5 474 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 FUOMA2VDF0 154 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 C5orf58C9J3I9 102 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 PLPP1O14494 284 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 PRAMEF10O60809 474 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 VIPR2P41587 438 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 CLK1P49759 484 aaKnown RBP18.65■□□□□ 0.58
SPNS1-201ENST00000311008 CCR8P51685 355 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 CDC42P60953 191 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 NCS1P62166 190 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 MESP2Q0VG99 397 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 PRSS53Q2L4Q9 553 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 SAXO2Q658L1 398 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 Q6ZPB1 254 aaPredicted RBP18.65■□□□□ 0.58
SPNS1-201ENST00000311008 SUSD6Q92537 303 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 CRELD1Q96HD1 420 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 COL21A1Q96P44 957 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 CXorf36Q9H7Y0 433 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 OSGIN1Q9UJX0 560 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 TMEM98Q9Y2Y6 226 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 SNX8Q9Y5X2 465 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 KIAA1549LQ6ZVL6 1849 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 PLK4O00444 970 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 PDE9AO76083 593 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 GABRB1P18505 474 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 MANFP55145 182 aaKnown RBP18.65■□□□□ 0.58
SPNS1-201ENST00000311008 TRIM16LQ309B1 348 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 PNCKQ6P2M8 343 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 CEACAM20Q6UY09 585 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 UTP15Q8TED0 518 aaKnown RBP18.65■□□□□ 0.58
SPNS1-201ENST00000311008 SMPDL3AQ92484 453 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 SMG7Q92540 1137 aaKnown RBP18.65■□□□□ 0.58
SPNS1-201ENST00000311008 MROQ9BYG7 248 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 GIN1Q9NXP7 522 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 ZNF226Q9NYT6 803 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 TAC3Q9UHF0 121 aa18.65■□□□□ 0.58
SPNS1-201ENST00000311008 SH3D21A4FU49 640 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 HEPACAM2A8MVW5 462 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 C5orf67F2Z3F1 127 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 CACNB4O00305 520 aaPredicted RBP18.64■□□□□ 0.57
SPNS1-201ENST00000311008 TOR1BO14657 336 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 PDPK1O15530 556 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 CBLP22681 906 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 P2RY2P41231 377 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 BCAP31P51572 246 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 OLR1P78380 273 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 CAMK1Q14012 370 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 TIGD6Q17RP2 521 aa18.64■□□□□ 0.57
SPNS1-201ENST00000311008 GAB4Q2WGN9 574 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms