RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 HOMEZQ8IX15 550 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 GLB1L3Q8NCI6 653 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-201ENST00000309428 SMG7Q92540 1137 aaKnown RBP12.15□□□□□ -0.46
RETREG3-201ENST00000309428 TMED9Q9BVK6 235 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 UCK2Q9BZX2 261 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 SLC32A1Q9H598 525 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 XKR8Q9H6D3 395 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 SLC25A37Q9NYZ2 338 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 MKLN1Q9UL63 735 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ISM1B1AKI9 464 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 FAM227AF5H4B4 570 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ADAMDEC1O15204 470 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 PCDHGA12O60330 932 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 OR2B3O76000 313 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 IFNA14P01570 189 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ATP1B2P14415 290 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-201ENST00000309428 SEC13P55735 322 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 EXOC3L2Q2M3D2 409 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 KLHL12Q53G59 568 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 WDR45BQ5MNZ6 344 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 GDPD4Q6W3E5 623 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 GDPD3Q7L5L3 318 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 LAPTM4BQ86VI4 370 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ZNF548Q8NEK5 533 aaPredicted RBP12.15□□□□□ -0.46
RETREG3-201ENST00000309428 GPR150Q8NGU9 434 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 EXOSC8Q96B26 276 aaKnown RBP12.15□□□□□ -0.46
RETREG3-201ENST00000309428 DHRS1Q96LJ7 313 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ZSWIM3Q96MP5 696 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 OR5M11Q96RB7 305 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ZSCAN5AQ9BUG6 496 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 OR2B2Q9GZK3 357 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 DCAF13Q9NV06 445 aaKnown RBP12.15□□□□□ -0.46
RETREG3-201ENST00000309428 ZDHHC3Q9NYG2 299 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 MRPL39Q9NYK5 338 aaKnown RBP12.15□□□□□ -0.46
RETREG3-201ENST00000309428 MYO16Q9Y6X6 1858 aa12.15□□□□□ -0.46
RETREG3-201ENST00000309428 SOBPA7XYQ1 873 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 PCCBP05166 539 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 KLK1P06870 262 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 ETFAP13804 333 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 SDC1P18827 310 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 ITGB8P26012 769 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 TNFSF8P32971 234 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 HNRNPFP52597 415 aaKnown RBP12.15□□□□□ -0.47
RETREG3-201ENST00000309428 DOC2AQ14183 400 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 LCN1P1Q5VSP4 162 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 PRSS48Q7RTY5 328 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 CYP4Z2PQ8N1L4 340 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 GRPEL2Q8TAA5 225 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 ADAMTS16Q8TE57 1224 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 RDH12Q96NR8 316 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 IMP3Q9NV31 184 aaKnown RBP12.15□□□□□ -0.47
RETREG3-201ENST00000309428 CXXC1Q9P0U4 656 aaPredicted RBP12.15□□□□□ -0.47
RETREG3-201ENST00000309428 CLCA2Q9UQC9 943 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 LOC285556D6RIA3 1793 aa12.15□□□□□ -0.47
RETREG3-201ENST00000309428 CCDC88CQ9P219 2028 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 MEIOCA2RUB1 952 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 WASHC1A8K0Z3 465 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 HPRP00739 348 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SDHBP21912 280 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 EIF2DP41214 584 aaKnown RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SLC19A1P41440 591 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 GABARAPL2P60520 117 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 LRRC26Q2I0M4 334 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 LEXMQ3ZCV2 418 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 IFI44LQ53G44 452 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CPZQ66K79 652 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 NOXRED1Q6NXP6 359 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 BHLHB9Q6PI77 547 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 AGTRAPQ6RW13 159 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 WASH2PQ6VEQ5 465 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 BCDIN3DQ7Z5W3 292 aaKnown RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CELF5Q8N6W0 485 aaKnown RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SLC37A3Q8NCC5 494 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 OR5H6Q8NGV6 325 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CIDECQ96AQ7 238 aaPredicted RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 FAM129BQ96TA1 746 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CTRCQ99895 268 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 TTTY10Q9BZA0 68 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SMURF1Q9HCE7 757 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 VNN3Q9NY84 501 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SARDHQ9UL12 918 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 FAM186AA6NE01 2351 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SCN3AQ9NY46 2000 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 TCRBV5S2A0A599 114 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 FAM172BPA6NC97 362 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 UNCXA6NJT0 531 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CPSF4LA6NMK7 179 aaKnown RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 SGTAO43765 313 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CRYZL1O95825 349 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CATP04040 527 aaKnown RBP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 IFNW1P05000 195 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CHRNB1P11230 501 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CSTF2P33240 577 aaKnown RBP eCLIP12.14□□□□□ -0.47
RETREG3-201ENST00000309428 PTGS2P35354 604 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CSNK1DP48730 415 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 UGT2B15P54855 530 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 CCDC58Q4VC31 144 aa12.14□□□□□ -0.47
RETREG3-201ENST00000309428 KIAA1161Q6NSJ0 714 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms