RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 C10orf142B7Z368 130 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 H3BM21 787 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 KDM1AO60341 852 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 SC5DO75845 299 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 MOCS2O96007 188 aaPredicted RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 LALBAP00709 142 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 GASTP01350 101 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 LAMP1P11279 417 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 AKT1P31749 480 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 OR1G1P47890 313 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 E2F1Q01094 437 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 DUSP4Q13115 394 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 MFSD13AQ14CX5 517 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 LARS2Q15031 903 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 AGERQ15109 404 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PTGES3Q15185 160 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 SF1Q15637 639 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 HENMT1Q5T8I9 393 aaKnown RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 PLAG1Q6DJT9 500 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 SLC30A6Q6NXT4 461 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 NOXA1Q86UR1 476 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 ANKRD46Q86W74 232 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 SCN4BQ8IWT1 228 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 OR11H4Q8NGC9 324 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 CLHC1Q8NHS4 586 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 HASPINQ8TF76 798 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 MAL2Q969L2 176 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 FAM131CQ96AQ9 280 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 KIAA1143Q96AT1 154 aaPredicted RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 LRIG1Q96JA1 1093 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 DOHHQ9BU89 302 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 PITHD1Q9GZP4 211 aaPredicted RBP5.2□□□□□ -1.58
VPS50-202ENST00000305866 SYNDIG1Q9H7V2 258 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 ZFYVE1Q9HBF4 777 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 RNF186Q9NXI6 227 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 TAS2R9Q9NYW1 312 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 OGDHLQ9ULD0 1010 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 HEATR5BQ9P2D3 2071 aa5.2□□□□□ -1.58
VPS50-202ENST00000305866 SH3D21A4FU49 640 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 PLD2O14939 933 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 SCAMP2O15127 329 aaKnown RBP5.19□□□□□ -1.58
VPS50-202ENST00000305866 STX7O15400 261 aaKnown RBP5.19□□□□□ -1.58
VPS50-202ENST00000305866 KLF4O43474 513 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 IFI6P09912 130 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 TNFRSF1BP20333 461 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 M6PRP20645 277 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 EEF1B2P24534 225 aaKnown RBP5.19□□□□□ -1.58
VPS50-202ENST00000305866 ZNF157P51786 506 aaPredicted RBP5.19□□□□□ -1.58
VPS50-202ENST00000305866 CLDN20P56880 219 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 OR2B6P58173 313 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 LSM11P83369 360 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS50-202ENST00000305866 RBBP4Q09028 425 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 ST3GAL4Q11206 333 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 TP53BP2Q13625 1128 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 DGCR6Q14129 220 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 CSRP2Q16527 193 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 PAN2Q504Q3 1202 aaKnown RBP5.19□□□□□ -1.58
VPS50-202ENST00000305866 ARMCX4Q5H9R4 360 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 CACHD1Q5VU97 1274 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 NOXRED1Q6NXP6 359 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 MILR1Q7Z6M3 343 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 KIF18BQ86Y91 864 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 NAGSQ8N159 534 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 MORN4Q8NDC4 146 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 OR9Q2Q8NGE9 314 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 PPP1R16AQ96I34 528 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 P2RY13Q9BPV8 354 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 DHRS9Q9BPW9 319 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 ARPC5LQ9BPX5 153 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 MENTQ9BUN1 341 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 SGPP1Q9BX95 441 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 BHLHE41Q9C0J9 482 aaPredicted RBP5.19□□□□□ -1.58
VPS50-202ENST00000305866 REXO4Q9GZR2 422 aaKnown RBP5.19□□□□□ -1.58
VPS50-202ENST00000305866 AICDAQ9GZX7 198 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 RNF32Q9H0A6 362 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 MMP28Q9H239 520 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 RIBC2Q9H4K1 309 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 NT5DC2Q9H857 520 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 ATP13A2Q9NQ11 1180 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 LHX9Q9NQ69 397 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS50-202ENST00000305866 KLHL21Q9UJP4 597 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 SNX11Q9Y5W9 270 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 CDH10Q9Y6N8 788 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 GLYATL1P3A0A0U1RQE8 302 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 CLIC1O00299 241 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 WWP2O00308 870 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 STK25O00506 426 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 AKR7A2O43488 359 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 MED26O95402 600 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 PRAMEF1O95521 474 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 FGF19O95750 216 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 LHCGRP22888 699 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 TEAD1P28347 426 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 PKLRP30613 574 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 RRM2P31350 389 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 CLCNKAP51800 687 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 AP2S1P53680 142 aaPredicted RBP5.19□□□□□ -1.58
VPS50-202ENST00000305866 CDK5Q00535 292 aa5.19□□□□□ -1.58
VPS50-202ENST00000305866 IL1RL1Q01638 556 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms