RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 OR2L2Q8NH16 312 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 CHPT1Q8WUD6 406 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 SH3YL1Q96HL8 342 aaPredicted RBP13.56□□□□□ -0.24
RAB40A-201ENST00000304236 ASB16Q96NS5 453 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 TAS2R9Q9NYW1 312 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 NDUFAF4Q9P032 175 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 SPASTQ9UBP0 616 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 POFUT2Q9Y2G5 429 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 MRPS17Q9Y2R5 130 aaKnown RBP13.56□□□□□ -0.24
RAB40A-201ENST00000304236 LRRK1Q38SD2 2015 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 PTPRZ1P23471 2315 aaPredicted RBP13.56□□□□□ -0.24
RAB40A-201ENST00000304236 MAGEB3O15480 346 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 SPINT1O43278 529 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 POP7O75817 140 aaKnown RBP13.56□□□□□ -0.24
RAB40A-201ENST00000304236 TGFB1P01137 390 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 ETFAP13804 333 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 DDX5P17844 614 aaKnown RBP13.56□□□□□ -0.24
RAB40A-201ENST00000304236 PSMB9P28065 219 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 ACADLP28330 430 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 AQP1P29972 269 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 KRT20P35900 424 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 GGT2P36268 569 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 TMEM52BQ4KMG9 183 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 CRB2Q5IJ48 1285 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 ZNF852Q6ZMS4 543 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 DCDC5Q6ZRR9 648 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 SLCO6A1Q86UG4 719 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 FAM124AQ86V42 546 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 ENTHD1Q8IYW4 607 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 OR10G2Q8NGC3 310 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 WDR48Q8TAF3 677 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 DNASE1L2Q92874 299 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 SMARCD2Q92925 531 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 RAD51AP1Q96B01 352 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 ARRDC3Q96B67 414 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 ZNF300Q96RE9 604 aaPredicted RBP13.56□□□□□ -0.24
RAB40A-201ENST00000304236 TRMT61BQ9BVS5 477 aaKnown RBP13.56□□□□□ -0.24
RAB40A-201ENST00000304236 C1GALT1Q9NS00 363 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 GPATCH2Q9NW75 528 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 ENOPH1Q9UHY7 261 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 ERGIC3Q9Y282 383 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 COQ6Q9Y2Z9 468 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 PCDHGA6Q9Y5G7 932 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 R4GN57 208 aa13.56□□□□□ -0.24
RAB40A-201ENST00000304236 PCDHGA12O60330 932 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 WBP4O75554 376 aaKnown RBP13.55□□□□□ -0.24
RAB40A-201ENST00000304236 C6P13671 934 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 CD72P21854 359 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 KELP23276 732 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 FCARP24071 287 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 EPHA2P29317 976 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 CHI3L1P36222 383 aaPredicted RBP13.55□□□□□ -0.24
RAB40A-201ENST00000304236 MASP1P48740 699 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 TAS2R50P59544 299 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 CDK6Q00534 326 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 RPA4Q13156 261 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 CYP2A13Q16696 494 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 RGS21Q2M5E4 152 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 HNRNPA1L2Q32P51 320 aaKnown RBP13.55□□□□□ -0.24
RAB40A-201ENST00000304236 FNDC3BQ53EP0 1204 aaKnown RBP13.55□□□□□ -0.24
RAB40A-201ENST00000304236 COX20Q5RI15 118 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 PRAMEF14Q5SWL7 426 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 UBE2UQ5VVX9 321 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 PRAMEF13Q5VWM6 474 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 CCDC81Q6ZN84 652 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 DEPDC4Q8N2C3 294 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 OR4C15Q8NGM1 316 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 GEMIN6Q8WXD5 167 aaKnown RBP13.55□□□□□ -0.24
RAB40A-201ENST00000304236 MYDGFQ969H8 173 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 SIGLEC11Q96RL6 698 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 OR51B5Q9H339 312 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 ICKQ9UPZ9 632 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 SH2B3Q9UQQ2 575 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 ANGPT4Q9Y264 503 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 DGKBQ9Y6T7 804 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 KIAA1549LQ6ZVL6 1849 aa13.55□□□□□ -0.24
RAB40A-201ENST00000304236 A0A1W2PRB8 838 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 CLDN24A6NM45 220 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 LAMTOR5O43504 91 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 FADS2O95864 444 aaKnown RBP13.54□□□□□ -0.24
RAB40A-201ENST00000304236 OCM2P0CE71 109 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 OCMP0CE72 109 aaPredicted RBP13.54□□□□□ -0.24
RAB40A-201ENST00000304236 ARAFP10398 606 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 UQCRC2P22695 453 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 NR4A1P22736 598 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 MLLT10P55197 1068 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 EEF1A2Q05639 463 aaKnown RBP13.54□□□□□ -0.24
RAB40A-201ENST00000304236 MICAQ29983 383 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 C9orf64Q5T6V5 341 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 TMIGD1Q6UXZ0 262 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 TSEN54Q7Z6J9 526 aaKnown RBP13.54□□□□□ -0.24
RAB40A-201ENST00000304236 TRIM74Q86UV6 250 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 ARMC8Q8IUR7 673 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 CCDC71Q8IV32 467 aaPredicted RBP13.54□□□□□ -0.24
RAB40A-201ENST00000304236 NFKBIDQ8NI38 313 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 APH1BQ8WW43 257 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 TAMM41Q96BW9 452 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 FEVQ99581 238 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 MYOCQ99972 504 aa13.54□□□□□ -0.24
RAB40A-201ENST00000304236 ZDHHC5Q9C0B5 715 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms