RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 FRKP42685 505 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 PPP5CP53041 499 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CASP9P55211 416 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 GPR68Q15743 365 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 METTL2BQ6P1Q9 378 aaKnown RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF440Q8IYI8 595 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 FBXO15Q8NCQ5 510 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 COQ8AQ8NI60 647 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CLEC4DQ8WXI8 215 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 BARD1Q99728 777 aaKnown RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SULT4A1Q9BR01 284 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ABCG4Q9H172 646 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ABCB8Q9NUT2 735 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 FAM118AQ9NWS6 357 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ACSL5Q9ULC5 683 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 NUP205Q92621 2012 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 KDELR3O43731 214 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 OR2B3O76000 313 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SP3Q02447 781 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 RCAN2Q14206 197 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 OR8J1Q8NGP2 316 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 KLRG1Q96E93 195 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TBX5Q99593 518 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CMKLR1Q99788 373 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TMLHEQ9NVH6 421 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SLC45A1Q9Y2W3 748 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 A0A0G2JLL6 359 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 C13orf42A0A1B0GVH6 325 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SPARCP09486 303 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CCND3P30281 292 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 PGDP52209 483 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CCINQ13939 588 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 EIF4HQ15056 248 aaKnown RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 PROX2Q3B8N5 592 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 LIPKQ5VXJ0 399 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 KCTD18Q6PI47 426 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 PRRT2Q7Z6L0 340 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ACOT13Q9NPJ3 140 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 C19orf25Q9UFG5 118 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ST14Q9Y5Y6 855 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CCL16O15467 120 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 EEF1E1O43324 174 aaKnown RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 MMP20O60882 483 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TLE2Q04725 743 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 GRSF1Q12849 480 aaKnown RBP eCLIP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 MSS51Q4VC12 460 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 WDR53Q7Z5U6 358 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 OR14K1Q8NGZ2 314 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SLC7A13Q8TCU3 470 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 NPAP1Q9NZP6 1156 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CAMTA1Q9Y6Y1 1673 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 MYBPHLA2RUH7 354 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SLC1A7O00341 560 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 RETP07949 1114 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 DNASE1P24855 282 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 ALDH3B2P48448 385 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 MGAT4CQ9UBM8 478 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 EXTL2Q9UBQ6 330 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 HS3ST4Q9Y661 456 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 EIF3FO00303 357 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 AHSGP02765 367 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 CAPN3P20807 821 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 OXTRP30559 389 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 HMGCS1Q01581 520 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SP2Q02086 613 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 NPRL3Q12980 569 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 GFOD2Q3B7J2 385 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 LBX2Q6XYB7 198 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PXKQ7Z7A4 578 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PIM3Q86V86 326 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 C7orf50Q9BRJ6 194 aaKnown RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 HERC2P3Q9BVR0 1158 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 OR10A4Q9H209 315 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 EDARQ9UNE0 448 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 MRPS17Q9Y2R5 130 aaKnown RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 CDC7O00311 574 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SNNO75324 88 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SPATA31D3P0C874 917 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 BCKDHAP12694 445 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 GTF2F2P13984 249 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PFKLP17858 780 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 LMO2P25791 158 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 CHRNA4P43681 627 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 GPR143P51810 404 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 RPS3AP61247 264 aaKnown RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PPIGQ13427 754 aaKnown RBP eCLIP7.36□□□□□ -1.234e-7■□□□□ 10.8
SF3B3-201ENST00000302516 MYLK3Q32MK0 819 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SPATA31D4Q6ZUB0 917 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 GLIS2Q9BZE0 524 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PADI2Q9Y2J8 665 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 SNED1Q8TER0 1413 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 KIAA0513O60268 411 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 PRAMEF11O60813 436 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 GGT1P19440 569 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 FBXO48Q5FWF7 155 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 XKR5Q6UX68 686 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 DPY19L3Q6ZPD9 716 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 ASRGL1Q7L266 308 aa7.36□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM121BQ9BXQ6 578 aaPredicted RBP7.36□□□□□ -1.23
SF3B3-201ENST00000302516 ASB6Q9NWX5 421 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms