RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 RIMS3Q9UJD0 308 aa14.92□□□□□ -0.02
HERPUD1-201ENST00000300302 ASB4Q9Y574 426 aa14.92□□□□□ -0.02
HERPUD1-201ENST00000300302 RHPN2P1A8MT19 583 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 H0YGG7 62 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 CERS1P27544 350 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 PPM1FP49593 454 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 MANFP55145 182 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 ARF3P61204 181 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 PPP1CAP62136 330 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 TP53BP1Q12888 1972 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 SRSF5Q13243 272 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 SLC14A1Q13336 389 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 GAB1Q13480 694 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 PRSS53Q2L4Q9 553 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 ZCCHC8Q6NZY4 707 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 GPR155Q7Z3F1 870 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 ADGRG5Q8IZF4 528 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 MAML2Q8IZL2 1156 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 CATSPER1Q8NEC5 780 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 UTP15Q8TED0 518 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 DNAJC9Q8WXX5 260 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 NCLNQ969V3 563 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 FAM162AQ96A26 154 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 EXOSC8Q96B26 276 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 CCDC3Q9BQI4 270 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 RAD21L1Q9H4I0 556 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 NEUROD4Q9HD90 331 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 LRRC42Q9Y546 428 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 SNX11Q9Y5W9 270 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 PEX1O43933 1283 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 NTRK1P04629 796 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 RETP07949 1114 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 FCGR1AP12314 374 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 CHI3L1P36222 383 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 FRKP42685 505 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 EPHA4P54764 986 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 C6orf132Q5T0Z8 1188 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 LPCAT4Q643R3 524 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 CPZQ66K79 652 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 FRMPD2BQ6IN97 320 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 IRGCQ6NXR0 463 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 ANGPTL8Q6UXH0 198 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 LILRA2Q8N149 483 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 PNPT1Q8TCS8 783 aaKnown RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 SERINC2Q96SA4 455 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 ELF4Q99607 663 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 ZNF184Q99676 751 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 C1GALT1Q9NS00 363 aa14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 ACSS1Q9NUB1 689 aaPredicted RBP14.91□□□□□ -0.02
HERPUD1-201ENST00000300302 CACNA1IQ9P0X4 2223 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 LOC105369274A0A096LPK9 316 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 LOC102723532A0A0G2JNH3 316 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 P2RX6O15547 441 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 KCNK5O95279 499 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 KRT75O95678 551 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 EIF2S1P05198 315 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 ST6GAL1P15907 406 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 UQCRC2P22695 453 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 PEX2P28328 305 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 RXRGP48443 463 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 PCBP4P57723 403 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 MLC1Q15049 377 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 RGNQ15493 299 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 LRRC36Q1X8D7 754 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 VMACQ2NL98 169 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 FAM98BQ52LJ0 330 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 ZC3H12BQ5HYM0 836 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 OGFRL1Q5TC84 451 aaPredicted RBP14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 OR4N4Q8N0Y3 316 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 C10orf111Q8N326 155 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 ARL10Q8N8L6 244 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 C19orf47Q8N9M1 422 aaKnown RBP14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 LRTOMTQ8WZ04 291 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 TRAPPC9Q96Q05 1148 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 UGT2B28Q9BY64 529 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 IL21RQ9HBE5 538 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 PHF11Q9UIL8 331 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 UTS2RQ9UKP6 389 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 FBXW2Q9UKT8 454 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 ATG4BQ9Y4P1 393 aa14.9□□□□□ -0.02
HERPUD1-201ENST00000300302 A0A1W2PR48 441 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 B3GALT2O43825 422 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 PRAMEF10O60809 474 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 CREG1O75629 220 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 TIPRLO75663 272 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 SMIM10L1P0DMW3 83 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 NTSP30990 170 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 SOAT1P35610 550 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 FADDQ13158 208 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 TAF11Q15544 211 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 GRAMD1BQ3KR37 738 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 PLK5Q496M5 336 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 SWT1Q5T5J6 900 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 ERMP1Q7Z2K6 904 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 ZNF551Q7Z340 670 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 CSNK1A1LQ8N752 337 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 TMEM102Q8N9M5 508 aaPredicted RBP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 PAPD5Q8NDF8 572 aaKnown RBP14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 ADCY4Q8NFM4 1077 aa14.89□□□□□ -0.03
HERPUD1-201ENST00000300302 OR52N2Q8NGI0 321 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms