RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 PTHP01270 115 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 C7P10643 843 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 JUPP14923 745 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 CD97P48960 835 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 SPINT3P49223 89 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 MVKQ03426 396 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 CAMK1Q14012 370 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 RGNQ15493 299 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 COX20Q5RI15 118 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 SDE2Q6IQ49 451 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 HSD11B1LQ7Z5J1 315 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 OR52L1Q8NGH7 329 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 BPIFB1Q8TDL5 484 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 TIFAQ96CG3 184 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 LRR1Q96L50 414 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 OR5M11Q96RB7 305 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 REEP4Q9H6H4 257 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 NTN4Q9HB63 628 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 TAS2R9Q9NYW1 312 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 HCN1O60741 890 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 IFNGR2P38484 337 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 SLC14A1Q13336 389 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 SPHARQ15513 63 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 ZNF691Q5VV52 312 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 ZNF544Q6NX49 715 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 C17orf99Q6UX52 265 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 ZNF852Q6ZMS4 543 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 PAPD5Q8NDF8 572 aaKnown RBP12.76□□□□□ -0.37
CASC4-201ENST00000299957 OR8D1Q8WZ84 308 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 FCGR1BQ92637 280 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 TADA1Q96BN2 335 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 RACGAP1Q9H0H5 632 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 CLMPQ9H6B4 373 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 ANKRA2Q9H9E1 313 aa12.76□□□□□ -0.37
CASC4-201ENST00000299957 PRAMEF33A0A0G2JMD5 474 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 LRRC72A6NJI9 287 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 GFRA2O00451 464 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 PGRMC2O15173 223 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 PRAMEF10O60809 474 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 IGFBP1P08833 259 aaPredicted RBP12.75□□□□□ -0.37
CASC4-201ENST00000299957 CYBAP13498 195 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 TIA1P31483 386 aaKnown RBP eCLIP12.75□□□□□ -0.379e-8■■■□□ 15.6
CASC4-201ENST00000299957 GP2P55259 537 aaKnown RBP12.75□□□□□ -0.37
CASC4-201ENST00000299957 HTRA3P83110 453 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 SLC5A12Q1EHB4 618 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 WSCD2Q2TBF2 565 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 GPR149Q86SP6 731 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 OR51G2Q8NGK0 314 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 GRHL3Q8TE85 626 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 PCNPQ8WW12 178 aaKnown RBP12.75□□□□□ -0.37
CASC4-201ENST00000299957 TMEM106CQ9BVX2 250 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 TP63Q9H3D4 680 aaPredicted RBP12.75□□□□□ -0.37
CASC4-201ENST00000299957 SNX7Q9UNH6 387 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 ZNF780BQ9Y6R6 833 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 WASH4PA8MWX3 477 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 ARNTLO00327 626 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 PI15O43692 258 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 HPRP00739 348 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 C1QCP02747 245 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 RETP07949 1114 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 AMD1P17707 334 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 CXCR2P25025 360 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 TGM4P49221 684 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 GET4Q7L5D6 327 aaPredicted RBP12.75□□□□□ -0.37
CASC4-201ENST00000299957 MMP21Q8N119 569 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 TEX26Q8N6G2 289 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 SCRN2Q96FV2 425 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 NIPSNAP1Q9BPW8 284 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 IRF2BPLQ9H1B7 796 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 NDOR1Q9UHB4 597 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 PPT2Q9UMR5 302 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 PCDHGB6Q9Y5F9 930 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 ABCA3Q99758 1704 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 CD8B2A6NJW9 211 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 HLA-DQA2P01906 255 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 CD8BP10966 210 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 LAMP2P13473 410 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 RPL3P39023 403 aaKnown RBP12.75□□□□□ -0.37
CASC4-201ENST00000299957 CLK3P49761 638 aaKnown RBP12.75□□□□□ -0.37
CASC4-201ENST00000299957 ISL1P61371 349 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 DEFB115Q30KQ5 88 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 LRRC17Q8N6Y2 441 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 QRSL1Q9H0R6 528 aaKnown RBP12.75□□□□□ -0.37
CASC4-201ENST00000299957 SPATA7Q9P0W8 599 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 NLKQ9UBE8 527 aa12.75□□□□□ -0.37
CASC4-201ENST00000299957 ZFC3H1O60293 1989 aaKnown RBP12.75□□□□□ -0.37
CASC4-201ENST00000299957 CLCA1A8K7I4 914 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 ANHXE9PGG2 379 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 PRMT3O60678 531 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 NT5EP21589 574 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 SMIM11AP58511 58 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 SUZ12Q15022 739 aaKnown RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 PTGES3Q15185 160 aaKnown RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 ZNF791Q3KP31 576 aaPredicted RBP12.74□□□□□ -0.37
CASC4-201ENST00000299957 BCL7AQ4VC05 210 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 STEAP3Q658P3 488 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 GTF2IRD2BQ6EKJ0 949 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 REEP3Q6NUK4 255 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 GTF2IRD2Q86UP8 949 aa12.74□□□□□ -0.37
CASC4-201ENST00000299957 PRSS58Q8IYP2 241 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms