RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 FSCN2O14926 492 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 JTBO76095 146 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 C1GALT1C1LP0DN25 315 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CDK4P11802 303 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 NFYAP23511 347 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 HNF1BP35680 557 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SREBF1P36956 1147 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 FABP6P51161 128 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CDK5Q00535 292 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SCAPQ12770 1279 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PLA2G7Q13093 441 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CRY2Q49AN0 593 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 KCTD18Q6PI47 426 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 NIPA2Q8N8Q9 360 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 FCRL3Q96P31 734 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TSSK3Q96PN8 268 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CYP2S1Q96SQ9 504 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 FEM1AQ9BSK4 669 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PLCXD1Q9NUJ7 323 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CNOT2Q9NZN8 540 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 KANSL3Q9P2N6 904 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ENPP5Q9UJA9 477 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ACSL6Q9UKU0 697 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PIK3C2AO00443 1686 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PLXNB3Q9ULL4 1909 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 FAM221BA6H8Z2 402 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 FABP1P07148 127 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 H1F0P07305 194 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CBSLP0DN79 551 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 BPIP17213 487 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CCND3P30281 292 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 BMP8BP34820 402 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CBSP35520 551 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 NUMBP49757 651 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 NTRK3Q16288 839 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 DOK6Q6PKX4 331 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 BMP8AQ7Z5Y6 402 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 OR51L1Q8NGJ5 315 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 OR13C3Q8NGS6 347 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF675Q8TD23 568 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 NPRL2Q8WTW4 380 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CELF1Q92879 486 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ADIPOR1Q96A54 375 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF594Q96JF6 807 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ARHGAP39Q9C0H5 1083 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 KLHL42Q9P2K6 505 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 EXOGQ9Y2C4 368 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PTPRBP23467 1997 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SYT7O43581 403 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 JRKO75564 520 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CDH12P55289 794 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ERVFC1P60507 584 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 HTD2P86397 168 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 MAMLD1Q13495 774 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 HNRNPDQ14103 355 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 KIAA1324Q6UXG2 1013 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 DDX53Q86TM3 631 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PYURFQ96I23 114 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF587Q96SQ5 575 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CNTNAP3Q9BZ76 1288 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 P2RX2Q9UBL9 471 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM200CA6NKL6 621 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF705FA8MVS1 300 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 F5H5P2 479 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF705DP0CH99 300 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF705BP0CI00 300 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 BCKDHAP12694 445 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 CDH15P55291 814 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF280AP59817 542 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 GRM2Q14416 872 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 STK11Q15831 433 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 LDLRAP1Q5SW96 308 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 AFMIDQ63HM1 303 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PDE12Q6L8Q7 609 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ALYREFQ86V81 257 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 C12orf29Q8N999 325 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 OR5H6Q8NGV6 325 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 STYXQ8WUJ0 223 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF606Q8WXB4 792 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 MTERF1Q99551 399 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TTYH2Q9BSA4 534 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SLC29A3Q9BZD2 475 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PPIL3Q9H2H8 161 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 POPDC2Q9HBU9 364 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SPANXCQ9NY87 97 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TMEM72A0PK05 275 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PMM2O15305 246 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 FOXO3O43524 673 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ATPAF1Q5TC12 328 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 PRPF38BQ5VTL8 546 aaKnown RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 C22orf42Q6IC83 251 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 HEPHL1Q6MZM0 1159 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 GPR65Q8IYL9 337 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 TRIB2Q92519 343 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ZNF641Q96N77 438 aaPredicted RBP4.68□□□□□ -1.66
CSMD3-201ENST00000297405 ALG9Q9H6U8 611 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 SLC2A6Q9UGQ3 507 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 LIPT1Q9Y234 373 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 A8MX80 341 aa4.68□□□□□ -1.66
CSMD3-201ENST00000297405 GADD45GO95257 159 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms