RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 THAP11Q96EK4 314 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 FAM120BQ96EK7 910 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 KCNC2Q96PR1 638 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 OR2A5Q96R48 311 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 PKP2Q99959 881 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 MACROD1Q9BQ69 325 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 TBCDQ9BTW9 1192 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 GORASP2Q9H8Y8 452 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 COPS7BQ9H9Q2 264 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 EVA1BQ9NVM1 165 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 GOLGA4Q13439 2230 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 A0A0J9YY10 115 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 BCAT2O15382 392 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 AQP9O43315 295 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 ERI3O43414 337 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 CTSVO60911 334 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 OR6B1O95007 311 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 STATHP02808 62 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 UMPSP11172 480 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 ENGP17813 658 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 LSSP48449 732 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 CSNK1EP49674 416 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 AFF3P51826 1226 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 MAZP56270 477 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 STXBP1P61764 594 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 SIGLEC14Q08ET2 396 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 DCTN2Q13561 401 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 SIM2Q14190 667 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 IZUMO2Q6UXV1 221 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 ZNF551Q7Z340 670 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 ASPGQ86U10 573 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 SERPINA11Q86U17 422 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 SATL1Q86VE3 508 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 MICU2Q8IYU8 434 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 ZCCHC7Q8N3Z6 543 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 ARL14Q8N4G2 192 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 NATD1Q8N6N6 113 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 TMEM102Q8N9M5 508 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 BAHD1Q8TBE0 780 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 CIDECQ96AQ7 238 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 REXO5Q96IC2 774 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 NSMCE2Q96MF7 247 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 EFHD1Q9BUP0 239 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 PRMT8Q9NR22 394 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 FAIMQ9NVQ4 179 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 NDUFA13Q9P0J0 144 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 ZNF282Q9UDV7 671 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 VPS4AQ9UN37 437 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 LMO7DNF2Z398 122 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 NOBOXO60393 691 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 CAPNS1P04632 268 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 TDGF1P13385 188 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 DDX5P17844 614 aaKnown RBP14.77□□□□□ -0.04
LSM6-201ENST00000296581 HIST1H1TP22492 207 aaPredicted RBP14.77□□□□□ -0.04
LSM6-201ENST00000296581 SOX11P35716 441 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 GAB1Q13480 694 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 TRIP10Q15642 601 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 MTX3Q5HYI7 312 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 OGFRL1Q5TC84 451 aaPredicted RBP14.77□□□□□ -0.04
LSM6-201ENST00000296581 MRM1Q6IN84 353 aaKnown RBP14.77□□□□□ -0.04
LSM6-201ENST00000296581 TRIM40Q6P9F5 258 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 TSSK4Q6SA08 328 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 B3GNT6Q6ZMB0 384 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 ZNF761Q86XN6 746 aaPredicted RBP14.77□□□□□ -0.04
LSM6-201ENST00000296581 OR52E4Q8NGH9 312 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 OR4A15Q8NGL6 344 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 ZFP90Q8TF47 636 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 FCRL4Q96PJ5 515 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 TPT1P8Q9HAU6 139 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 TIMMDC1Q9NPL8 285 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 DOLKQ9UPQ8 538 aa14.77□□□□□ -0.04
LSM6-201ENST00000296581 A0A0G2JN53 185 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 PEX1O43933 1283 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 SCELO95171 688 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 C6orf47O95873 294 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 C1QCP02747 245 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 ANXA6P08133 673 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 PPIBP23284 216 aaKnown RBP14.77□□□□□ -0.05
LSM6-201ENST00000296581 ATP5A1P25705 553 aaKnown RBP14.77□□□□□ -0.05
LSM6-201ENST00000296581 PSMA4P25789 261 aaKnown RBP14.77□□□□□ -0.05
LSM6-201ENST00000296581 PEX2P28328 305 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 FNTBP49356 437 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 HBA1P69905 142 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 LPCAT4Q643R3 524 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 OGFOD3Q6PK18 319 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 WDR5BQ86VZ2 330 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 RSC1A1Q92681 617 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 GAL3ST3Q96A11 431 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 TEX10Q9NXF1 929 aaPredicted RBP14.77□□□□□ -0.05
LSM6-201ENST00000296581 TUBA8Q9NY65 449 aaPredicted RBP14.77□□□□□ -0.05
LSM6-201ENST00000296581 POMT2Q9UKY4 750 aa14.77□□□□□ -0.05
LSM6-201ENST00000296581 FAM58BPP0C7Q3 252 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 DRD2P14416 443 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 C21orf59P57076 290 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 RGS1Q08116 209 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 TGM3Q08188 693 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 CYP51A1Q16850 503 aa14.76□□□□□ -0.05
LSM6-201ENST00000296581 ZNF362Q5T0B9 420 aaPredicted RBP14.76□□□□□ -0.05
LSM6-201ENST00000296581 THOC7Q6I9Y2 204 aaKnown RBP14.76□□□□□ -0.05
LSM6-201ENST00000296581 ACOT4Q8N9L9 421 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms