RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 SATL1Q86VE3 508 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 AMIGO1Q86WK6 493 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 SIX5Q8N196 739 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 OR10Q1Q8NGQ4 319 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 C1orf216Q8TAB5 229 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 TM4SF18Q96CE8 201 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 FBXL20Q96IG2 436 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 OSBPL10Q9BXB5 764 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 GSDMCQ9BYG8 508 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 AICDAQ9GZX7 198 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 CHST8Q9H2A9 424 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 EPB41L1Q9H4G0 881 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 TBC1D17Q9HA65 648 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 SPHK1Q9NYA1 384 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 IFT80Q9P2H3 777 aaPredicted RBP8.71□□□□□ -1.02
PDPN-201ENST00000294489 RAPGEFL1Q9UHV5 662 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 ORC6Q9Y5N6 252 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 SLCO1B1Q9Y6L6 691 aa8.71□□□□□ -1.02
PDPN-201ENST00000294489 K7ESF4 209 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 LCMT2O60294 686 aaKnown RBP8.7□□□□□ -1.02
PDPN-201ENST00000294489 SEC24DO94855 1032 aaPredicted RBP8.7□□□□□ -1.02
PDPN-201ENST00000294489 NUDT7P0C024 238 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 THEGLP0DJG4 465 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 CMPK1P30085 196 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 DCTP40126 519 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 ACTR1BP42025 376 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 ALDH9A1P49189 494 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 IST1P53990 364 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 ACTR1AP61163 376 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 ADARB1P78563 741 aaKnown RBP8.7□□□□□ -1.02
PDPN-201ENST00000294489 KIR2DS3Q14952 304 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 MPEG1Q2M385 716 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 KCTD21Q4G0X4 260 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 TMEM35AQ53FP2 167 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 GCNT6Q5T4J0 391 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 TTC23Q5W5X9 447 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 PLD3Q8IV08 490 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 TSC22D3Q99576 134 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 NLNQ9BYT8 704 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 POT1Q9NUX5 634 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 USE1Q9NZ43 259 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 TAAR2Q9P1P5 351 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 ANKMY1Q9P2S6 941 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 C3orf18Q9UK00 162 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 MAGED1Q9Y5V3 778 aaPredicted RBP8.7□□□□□ -1.02
PDPN-201ENST00000294489 TMEM131Q92545 1883 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 KIR2DS5A0A0G2JLQ3 304 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 A0A0G2JNG1 304 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 OR5K4A6NMS3 321 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 KIR2DS3K7RE56 304 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 SUV39H1O43463 412 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 WNT1P04628 370 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 TRA2BP62995 288 aaKnown RBP8.7□□□□□ -1.02
PDPN-201ENST00000294489 PPP2R2BQ00005 443 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 ILF3Q12906 894 aaKnown RBP eCLIP8.7□□□□□ -1.02
PDPN-201ENST00000294489 KIR2DS5Q14953 304 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 C16orf72Q14CZ0 275 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 ZIK1Q3SY52 487 aaPredicted RBP8.7□□□□□ -1.02
PDPN-201ENST00000294489 OR4C11Q6IEV9 310 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 OR2T5Q6IEZ7 315 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 PAQR7Q86WK9 346 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 FBXL6Q8N531 539 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 FAM160A2Q8N612 972 aaPredicted RBP8.7□□□□□ -1.02
PDPN-201ENST00000294489 MFSD9Q8NBP5 474 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 ZNF555Q8NEP9 628 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 OR2T29Q8NH02 315 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 LCN9Q8WX39 176 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 MAL2Q969L2 176 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 TBC1D20Q96BZ9 403 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 HSH2DQ96JZ2 352 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 GRIP2Q9C0E4 1043 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 TCEAL2Q9H3H9 227 aaPredicted RBP8.7□□□□□ -1.02
PDPN-201ENST00000294489 DDX31Q9H8H2 851 aaKnown RBP8.7□□□□□ -1.02
PDPN-201ENST00000294489 TM9SF3Q9HD45 589 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 U3KQV3 271 aa8.7□□□□□ -1.02
PDPN-201ENST00000294489 ISM1B1AKI9 464 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 BTN3A3O00478 584 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 PDPK1O15530 556 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 NOBOXO60393 691 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 CLIC3O95833 236 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 ETFAP13804 333 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 UQCRC2P22695 453 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 PAX7P23759 505 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 HOXA6P31267 233 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 BCL6P41182 706 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SSR2P43308 183 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 RXRGP48443 463 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 PLA2G16P53816 162 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 RAD23AP54725 363 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 MANFP55145 182 aaKnown RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 TUBA4AP68366 448 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SIM2Q14190 667 aaPredicted RBP8.69□□□□□ -1.02
PDPN-201ENST00000294489 RFX4Q33E94 735 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 KIAA1614Q5VZ46 1190 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 SLC30A9Q6PML9 568 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 TMEM26Q6ZUK4 368 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 USP51Q70EK9 711 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 GALNT10Q86SR1 603 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 PARGQ86W56 976 aa8.69□□□□□ -1.02
PDPN-201ENST00000294489 OFCC1Q8IZS5 231 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms