RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SF3B4Q15427 424 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 CST6Q15828 149 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 DUOXA1Q1HG43 343 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 VTCN1Q7Z7D3 282 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 ELSPBP1Q96BH3 223 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 HDAC8Q9BY41 377 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 MBNL1Q9NR56 388 aaKnown RBP17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 SNX6Q9UNH7 406 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 SH2B3Q9UQQ2 575 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 PCDHGA6Q9Y5G7 932 aa17.53■□□□□ 0.4
PDLIM3-201ENST00000284767 NPIPB8E9PQR5 432 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 CLIC1O00299 241 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 HAT1O14929 419 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 C1orf105O95561 183 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 RPLP0P05388 317 aaKnown RBP17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 GPX2P18283 190 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 GADD45AP24522 165 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 KIR3DL1P43629 444 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 MTAPQ13126 283 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 GGTA1PQ4G0N0 100 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 FRG2Q64ET8 278 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 SLC46A3Q7Z3Q1 461 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 C11orf96Q7Z7L8 435 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 C2orf73Q8N5S3 287 aaPredicted RBP17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 APOLD1Q96LR9 279 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 FRG2BQ96QU4 278 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 EBPLQ9BY08 206 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 SIRT5Q9NXA8 310 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 SLC23A2Q9UGH3 650 aa17.52■□□□□ 0.4
PDLIM3-201ENST00000284767 K7EQS6 105 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 CASP3P42574 277 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 ADAM15Q13444 863 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 WSCD2Q2TBF2 565 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 FBXO43Q4G163 708 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 BCL7AQ4VC05 210 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 ZNF765Q7L2R6 523 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 HDDC3Q8N4P3 179 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 ZNF480Q8WV37 535 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 MKRN2Q9H000 416 aaKnown RBP17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 CLDND1Q9NY35 253 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 PLAGL1Q9UM63 463 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 OR1A2Q9Y585 309 aa17.52■□□□□ 0.39
PDLIM3-201ENST00000284767 RGS13O14921 159 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 EPN2O95208 641 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 DBTP11182 482 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 JUPP14923 745 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 ENGP17813 658 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 STARD3Q14849 445 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 SLX4IPQ5VYV7 408 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 DESI1Q6ICB0 168 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 OR4F3Q6IEY1 312 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 PARP16Q8N5Y8 322 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 FAM83FQ8NEG4 500 aaPredicted RBP17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 ZNF486Q96H40 463 aaPredicted RBP17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 FOPNLQ96NB1 174 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 GDF15Q99988 308 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 CDADC1Q9BWV3 514 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 FKBP14Q9NWM8 211 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 PEX16Q9Y5Y5 336 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 CFAP20Q9Y6A4 193 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 FPGTO14772 594 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 DSCR3O14972 297 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 SNX4O95219 450 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 MED26O95402 600 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 CDK1P06493 297 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 PXNP49023 591 aaPredicted RBP17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 VEZF1Q14119 521 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 PTOV1Q86YD1 416 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 SYTL1Q8IYJ3 562 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 IL17FQ96PD4 163 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 PANX1Q96RD7 426 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 ZCCHC2Q9C0B9 1178 aaKnown RBP17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 TPK1Q9H3S4 243 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 EPHX3Q9H6B9 360 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 RAPGEFL1Q9UHV5 662 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 DENND4AQ7Z401 1863 aa17.51■□□□□ 0.39
PDLIM3-201ENST00000284767 PAK4O96013 591 aaPredicted RBP17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 SPNP16150 400 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 RCVRNP35243 200 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 DEFA1P59665 94 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 DEFA3P59666 94 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 FGL2Q14314 439 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 METTL4Q8N3J2 472 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 NEIL2Q969S2 332 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 RSPH9Q9H1X1 276 aaPredicted RBP17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 PRM3Q9NNZ6 103 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 AP1M2Q9Y6Q5 423 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 TICRRQ7Z2Z1 1910 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 CLCA1A8K7I4 914 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 A8MU76 341 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 ETHE1O95571 254 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 PRPS1L1P21108 318 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 C21orf33P30042 268 aaPredicted RBP17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 GGT2P36268 569 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 KIR2DL1P43626 348 aaPredicted RBP17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 TBPL1P62380 186 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 IFITM2Q01629 132 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 IQCCQ4KMZ1 466 aa17.5■□□□□ 0.39
PDLIM3-201ENST00000284767 FAM46CQ5VWP2 391 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms