RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 GCM2O75603 506 aaPredicted RBP17.08■□□□□ 0.32
CAPN1-201ENST00000279247 DDCP20711 480 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 GPC1P35052 558 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 PDE7AQ13946 482 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 HEPACAMQ14CZ8 416 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 CBLL1Q75N03 491 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 ATG16L2Q8NAA4 619 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 ZNF555Q8NEP9 628 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 WDR92Q96MX6 357 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 PHF12Q96QT6 1004 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 RBM4BQ9BQ04 359 aaKnown RBP17.08■□□□□ 0.32
CAPN1-201ENST00000279247 YIPF4Q9BSR8 244 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 RBM4Q9BWF3 364 aaKnown RBP17.08■□□□□ 0.32
CAPN1-201ENST00000279247 NLNQ9BYT8 704 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 RHBGQ9H310 441 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 MAGIXQ9H6Y5 334 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 FAM118AQ9NWS6 357 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 KIF17Q9P2E2 1029 aa17.08■□□□□ 0.32
CAPN1-201ENST00000279247 PDPK1O15530 556 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 PRAMEF10O60809 474 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 HNRNPA2B1P22626 353 aaKnown RBP17.07■□□□□ 0.32
CAPN1-201ENST00000279247 SLC19A1P41440 591 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 CDK9P50750 372 aaKnown RBP17.07■□□□□ 0.32
CAPN1-201ENST00000279247 PPP2R2BQ00005 443 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 NFATC4Q14934 902 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 C10orf62Q5T681 223 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-201ENST00000279247 CEACAM20Q6UY09 585 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 Q6ZSR6 202 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 EIF3MQ7L2H7 374 aaKnown RBP17.07■□□□□ 0.32
CAPN1-201ENST00000279247 AMIGO1Q86WK6 493 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 OR2L8Q8NGY9 312 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 MBOAT4Q96T53 435 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 ZNF624Q9P2J8 865 aaPredicted RBP17.07■□□□□ 0.32
CAPN1-201ENST00000279247 EBF1Q9UH73 591 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 MAPRE3Q9UPY8 281 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 PCDHGA8Q9Y5G5 932 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 A0A1W2PS29 197 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 MBTPS2O43462 519 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 IGFBP5P24593 272 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 CDK6Q00534 326 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 C1orf61Q13536 156 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 NDUFAF5Q5TEU4 345 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 GPR155Q7Z3F1 870 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 CYP4Z1Q86W10 505 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 NECTIN4Q96NY8 510 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 TPSD1Q9BZJ3 242 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 CHST8Q9H2A9 424 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 SRMSQ9H3Y6 488 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 ANKRA2Q9H9E1 313 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 ORC6Q9Y5N6 252 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 LRIT2A6NDA9 550 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 PPIBP23284 216 aaKnown RBP17.07■□□□□ 0.32
CAPN1-201ENST00000279247 ARHGDIAP52565 204 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 OR4C11Q6IEV9 310 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 REEP1Q9H902 201 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 CD320Q9NPF0 282 aa17.07■□□□□ 0.32
CAPN1-201ENST00000279247 POLR2CP19387 275 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 AGXTP21549 392 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 CERS1P27544 350 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 EPHA2P29317 976 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 RRM2P31350 389 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 RPL3P39023 403 aaKnown RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 PRRT3Q5FWE3 981 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 TJAP1Q5JTD0 557 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 TOR1AIP1Q5JTV8 583 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 TRIM40Q6P9F5 258 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 APLFQ8IW19 511 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 C8orf59Q8N0T1 100 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 SVOPLQ8N434 492 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 KCT2Q8NC54 265 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 OR13H1Q8NG92 308 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 OR52N2Q8NGI0 321 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 ZCCHC10Q8TBK6 192 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 RMI1Q9H9A7 625 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 DDX18Q9NVP1 670 aaKnown RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 IFT80Q9P2H3 777 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 RHCGQ9UBD6 479 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 COLEC10Q9Y6Z7 277 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 FANCMQ8IYD8 2048 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 LRRC72A6NJI9 287 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 PTGES3LE9PB15 166 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 J3KTA2 159 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 VILLO15195 856 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 SEMA4FO95754 770 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 BCHEP06276 602 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 CELA2BP08218 269 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 PCSK2P16519 638 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 MAGP20916 626 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 FUT4P22083 530 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 SNRPNP63162 240 aaKnown RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 SLAMF1Q13291 335 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 GANABQ14697 944 aaKnown RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 DCP2Q8IU60 420 aaKnown RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 TRIM48Q8IWZ4 208 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 OR52E4Q8NGH9 312 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 DOK4Q8TEW6 326 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 TAMM41Q96BW9 452 aa17.06■□□□□ 0.32
CAPN1-201ENST00000279247 CDX2Q99626 313 aaPredicted RBP17.06■□□□□ 0.32
CAPN1-201ENST00000279247 MVB12BQ9H7P6 319 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms