RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 NBL1P41271 181 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 WASP42768 502 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 LMAN2Q12907 356 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 ASAH1Q13510 395 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 LYPLAL1Q5VWZ2 237 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 TIGD3Q6B0B8 471 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 ADIPOR2Q86V24 386 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 PTOV1Q86YD1 416 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 GALNT12Q8IXK2 581 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 ZBTB44Q8NCP5 570 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 PSD4Q8NDX1 1056 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 WFIKKN2Q8TEU8 576 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 METTL2AQ96IZ6 378 aaKnown RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 HSH2DQ96JZ2 352 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 RPRD1AQ96P16 312 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 DEPDC7Q96QD5 511 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 REXO4Q9GZR2 422 aaKnown RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 TMEM245Q9H330 911 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 AASSQ9UDR5 926 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 MAPRE3Q9UPY8 281 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 CORO2BQ9UQ03 480 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 MUC22E2RYF6 1773 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 BPTFQ12830 3046 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 EIF3FO00303 357 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 OR1I1O60431 355 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 PIRTP0C851 137 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 OR1E1P30953 314 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 PLA2G5P39877 138 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 MLLT3P42568 568 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 HSPA7P48741 367 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 CDKN1CP49918 316 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 DMPKQ09013 629 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 CDH18Q13634 790 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 EOGTQ5NDL2 527 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 DOK6Q6PKX4 331 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 CHST9Q7L1S5 443 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 TRMT11Q7Z4G4 463 aaKnown RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 FAM124AQ86V42 546 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 NLRP8Q86W28 1048 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 ATCAYQ86WG3 371 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 DCBLD1Q8N8Z6 715 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 OR4C15Q8NGM1 316 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 INPP5KQ9BT40 448 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 CINPQ9BW66 212 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 ADGRE3Q9BY15 652 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 CIPCQ9C0C6 399 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 OR51E2Q9H255 320 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 CHST8Q9H2A9 424 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 SMURF1Q9HCE7 757 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 FAM120CQ9NX05 1096 aaKnown RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 THAP10Q9P2Z0 257 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 UBA2Q9UBT2 640 aaPredicted RBP9.89□□□□□ -0.83
UPF3B-201ENST00000276201 PPT2Q9UMR5 302 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 CARD8Q9Y2G2 431 aa9.89□□□□□ -0.83
UPF3B-201ENST00000276201 KCNE1BA0A087WTH5 132 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 A0A1B0GVM2 712 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 RFXANKO14593 260 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ADAMDEC1O15204 470 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 STX7O15400 261 aaKnown RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 LILRB5O75023 590 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 GJB3O75712 270 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 APBB3O95704 486 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ALPPP05187 535 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CBSLP0DN79 551 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 EPB42P16452 691 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CYP2A7P20853 494 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 PRPS1L1P21108 318 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CHMP24386 653 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 HLA-DMAP28067 261 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 C21orf33P30042 268 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 NTSR1P30989 418 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CA5AP35218 305 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CBSP35520 551 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 RFX2P48378 723 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 KCNJ10P78508 379 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 HMGCS1Q01581 520 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 RHAGQ02094 409 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CARTPTQ16568 116 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 C18orf21Q32NC0 220 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 BCL7AQ4VC05 210 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 FAM209AQ5JX71 171 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CXorf57Q6NSI4 855 aaKnown RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ZCCHC8Q6NZY4 707 aaKnown RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 DNAJC14Q6Y2X3 702 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF605Q86T29 641 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 WDR5BQ86VZ2 330 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 TCTE3Q8IZS6 198 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 RDH10Q8IZV5 341 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CYP4Z2PQ8N1L4 340 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 TCAIMQ8N3R3 496 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CAMKK1Q8N5S9 505 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF557Q8N988 423 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 TSTD1Q8NFU3 115 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 OR8J2Q8NGG1 315 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 SLC7A6Q92536 515 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 KIAA1143Q96AT1 154 aaPredicted RBP9.88□□□□□ -0.83
UPF3B-201ENST00000276201 GABRG3Q99928 467 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 CENPOQ9BU64 300 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 ACPTQ9BZG2 426 aa9.88□□□□□ -0.83
UPF3B-201ENST00000276201 RASSF1Q9NS23 344 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms