RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CLCA1A8K7I4 914 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 A8MUA0 341 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 PDPK1O15530 556 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ARHGEF9O43307 516 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 CCNDBP1O95273 360 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TRAPPC2P0DI81 140 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TRAPPC2BP0DI82 140 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ACRV1P26436 265 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SERPINA4P29622 427 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ERP29P30040 261 aaKnown RBP15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 LIMK1P53667 647 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 MAPK12P53778 367 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 CERS6Q6ZMG9 384 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 NPAS3Q8IXF0 933 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 FAM217AQ8IXS0 508 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 DNAJC22Q8N4W6 341 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 CHST14Q8NCH0 376 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 VOPP1Q96AW1 172 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TBC1D20Q96BZ9 403 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 HRASLS5Q96KN8 279 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 HDHD5Q9BXW7 423 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 FAM8A1Q9UBU6 413 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 PCDHGB2Q9Y5G2 931 aa15.3■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TEX51A0A1B0GUA7 166 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 PCP4L1A6NKN8 68 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ATP6V1G2-DDX39BF2Z307 99 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TAPBPO15533 448 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 MTX2O75431 263 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 STK11Q15831 433 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 PTCHD3Q3KNS1 767 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 DOK6Q6PKX4 331 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 Q6ZVU0 165 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 NLRP8Q86W28 1048 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 YIPF7Q8N8F6 280 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ZNF557Q8N988 423 aaPredicted RBP15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 IRF7Q92985 503 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SERHLQ9NQF3 203 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 GLTPQ9NZD2 209 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SPASTQ9UBP0 616 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ZNF490Q9ULM2 529 aaPredicted RBP15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 PCDHB1Q9Y5F3 818 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 RGS14O43566 566 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 CCNYL3P0C7X3 344 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 LHCGRP22888 699 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 CSNK2BP67870 215 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 BTBD16Q32M84 506 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ATP13A5Q4VNC0 1218 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 CACHD1Q5VU97 1274 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 STX19Q8N4C7 294 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 OR4M2Q8NGB6 313 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SKA2Q8WVK7 121 aaPredicted RBP15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SH3KBP1Q96B97 665 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 MTFMTQ96DP5 389 aaKnown RBP15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 MCCC1Q96RQ3 725 aaPredicted RBP15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 REEP1Q9H902 201 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SPHK2Q9NRA0 654 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 NUDT4Q9NZJ9 180 aa15.29■□□□□ 0.04
MAP1LC3B-201ENST00000268607 A0A0B4J293 547 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 PDGFAP04085 211 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ICAM2P13598 275 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TIE1P35590 1138 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SLC6A11P48066 632 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ZNF77Q15935 545 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TANGO2Q6ICL3 276 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 FAM122CQ6P4D5 195 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 UBE2J2Q8N2K1 259 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TMEM132CQ8N3T6 1108 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ZBTB2Q8N680 514 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SETD6Q8TBK2 473 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 GPR151Q8TDV0 419 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 RNF31Q96EP0 1072 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ZNF556Q9HAH1 456 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 AP3M1Q9Y2T2 418 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ERN1O75460 977 aaKnown RBP15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 OTCP00480 354 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 CSF2P04141 144 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 CD9P21926 228 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SPAM1P38567 509 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 GNPDA1P46926 289 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 IDH2P48735 452 aaKnown RBP15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SNRPD1P62314 119 aaKnown RBP15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 PTSQ03393 145 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 FAHD1Q6P587 224 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 SUV39H2Q9H5I1 410 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 WWOXQ9NZC7 414 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 CFL2Q9Y281 166 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TRAPPC4Q9Y296 219 aa15.28■□□□□ 0.04
MAP1LC3B-201ENST00000268607 M0R129 80 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 OR2B3O76000 313 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 HNRNPA1P09651 372 aaKnown RBP eCLIP15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 IGFBP4P22692 258 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 RPS5P46782 204 aaKnown RBP15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 RGS4P49798 205 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 GZMKP49863 264 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ABHD18Q0P651 414 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ST3GAL4Q11206 333 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 ARHGEF7Q14155 803 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 TDHQ8IZJ6 230 aa15.27■□□□□ 0.04
MAP1LC3B-201ENST00000268607 NXPE1Q8N323 547 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms