RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 M0R296 226 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 ZNF888P0CJ79 500 aaPredicted RBP15.53■□□□□ 0.08
TPM1-201ENST00000267996 VCANP13611 3396 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 ST6GAL1P15907 406 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 EPHA4P54764 986 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 POLE2P56282 527 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 BNIP3Q12983 259 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 NDUFAF5Q5TEU4 345 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 CPZQ66K79 652 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.53■□□□□ 0.08
TPM1-201ENST00000267996 PAPD5Q8NDF8 572 aaKnown RBP15.53■□□□□ 0.08
TPM1-201ENST00000267996 PKP2Q99959 881 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 TACO1Q9BSH4 297 aaKnown RBP15.53■□□□□ 0.08
TPM1-201ENST00000267996 SPATA9Q9BWV2 254 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 ROGDIQ9GZN7 287 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 RAB33BQ9H082 229 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 CHST8Q9H2A9 424 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 SLAMF7Q9NQ25 335 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 LYARQ9NX58 379 aaKnown RBP15.53■□□□□ 0.08
TPM1-201ENST00000267996 SUSD2Q9UGT4 822 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 CORO2BQ9UQ03 480 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 ATG4BQ9Y4P1 393 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 LRRC42Q9Y546 428 aa15.53■□□□□ 0.08
TPM1-201ENST00000267996 URADA6NGE7 173 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 PDPK1O15530 556 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 ZSCAN9O15535 394 aaPredicted RBP15.52■□□□□ 0.08
TPM1-201ENST00000267996 HRO43593 1189 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 SH3BP5O60239 455 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 KCNK5O95279 499 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 CERS1P27544 350 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 ALDH9A1P49189 494 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 SNRPNP63162 240 aaKnown RBP15.52■□□□□ 0.08
TPM1-201ENST00000267996 BTN3A2P78410 334 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 MLC1Q15049 377 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 PEAR1Q5VY43 1037 aaPredicted RBP15.52■□□□□ 0.08
TPM1-201ENST00000267996 TMEM105Q8N8V8 129 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 C19orf47Q8N9M1 422 aaKnown RBP15.52■□□□□ 0.08
TPM1-201ENST00000267996 TMEM102Q8N9M5 508 aaPredicted RBP15.52■□□□□ 0.08
TPM1-201ENST00000267996 UCN3Q969E3 161 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 RERGQ96A58 199 aaPredicted RBP15.52■□□□□ 0.08
TPM1-201ENST00000267996 EFHD1Q9BUP0 239 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 COPS7BQ9H9Q2 264 aaPredicted RBP15.52■□□□□ 0.08
TPM1-201ENST00000267996 FAM60AQ9NP50 221 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 C1GALT1Q9NS00 363 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 ACSS1Q9NUB1 689 aaPredicted RBP15.52■□□□□ 0.08
TPM1-201ENST00000267996 EPHA6Q9UF33 1036 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 FBXO4Q9UKT5 387 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 C15orf41Q9Y2V0 281 aa15.52■□□□□ 0.08
TPM1-201ENST00000267996 TMEM131Q92545 1883 aa15.52■□□□□ 0.07
TPM1-201ENST00000267996 CXCR6O00574 342 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 PROM1O43490 865 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 CDH3P22223 829 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 PSMA4P25789 261 aaKnown RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 SOX11P35716 441 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 MVDP53602 400 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 BIRC2Q13490 618 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 MAP7Q14244 749 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 WLSQ5T9L3 541 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 OGFRL1Q5TC84 451 aaPredicted RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 TMEM214Q6NUQ4 689 aaKnown RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 KANSL1Q7Z3B3 1105 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 DGLUCYQ7Z3D6 616 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 PTOV1Q86YD1 416 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ZZZ3Q8IYH5 903 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 TRIML2Q8N7C3 387 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ARL10Q8N8L6 244 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 PSMA8Q8TAA3 256 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ZC3H10Q96K80 434 aaKnown RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 SERINC2Q96SA4 455 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 EPS8L2Q9H6S3 715 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 CES1P1Q9UKY3 287 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 RNF215Q9Y6U7 377 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ARID1BQ8NFD5 2236 aaPredicted RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 PI4KAP42356 2102 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 GSTA4O15217 222 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 NUDT21O43809 227 aaKnown RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 PEX1O43933 1283 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 GMNNO75496 209 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 AIFM1O95831 613 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 RETP07949 1114 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ARRB1P49407 418 aaPredicted RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 SUZ12Q15022 739 aaKnown RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 RGNQ15493 299 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ADRM1Q16186 407 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 CYP51A1Q16850 503 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ERICH5Q6P6B1 374 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 DNAJC22Q8N4W6 341 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ZNF655Q8N720 491 aaPredicted RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 DTWD2Q8NBA8 298 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ZBED6CLQ96FA7 236 aaPredicted RBP15.51■□□□□ 0.07
TPM1-201ENST00000267996 SLC35A5Q9BS91 424 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 CHRNA10Q9GZZ6 450 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 SLC35C2Q9NQQ7 365 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 GPATCH2Q9NW75 528 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 KCMF1Q9P0J7 381 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 C5AR2Q9P296 337 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 ANAPC2Q9UJX6 822 aa15.51■□□□□ 0.07
TPM1-201ENST00000267996 SLC9B1P1A6NJY1 282 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 RHPN2P1A8MT19 583 aa15.5■□□□□ 0.07
TPM1-201ENST00000267996 HNRNPRO43390 633 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms