RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 IRF5Q13568 498 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 LPPQ93052 612 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 GAS2L1Q99501 681 aaPredicted RBP11.69□□□□□ -0.54
SRRM4-201ENST00000267260 DNTTIP1Q9H147 329 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 SAP18O00422 153 aaKnown RBP11.69□□□□□ -0.54
SRRM4-201ENST00000267260 LRRTM2O43300 516 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 TBX10O75333 385 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 CILPO75339 1184 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 PTTG1O95997 202 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 MT-CYBP00156 380 aaPredicted RBP11.69□□□□□ -0.54
SRRM4-201ENST00000267260 AOC1P19801 751 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 CTSOP43234 321 aaPredicted RBP11.69□□□□□ -0.54
SRRM4-201ENST00000267260 CD97P48960 835 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 HADHBP55084 474 aaKnown RBP11.69□□□□□ -0.54
SRRM4-201ENST00000267260 ANKRD54Q6NXT1 300 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 KCT2Q8NC54 265 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 ALG3Q92685 438 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 LURAP1Q96LR2 239 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 YIPF4Q9BSR8 244 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 ACP6Q9NPH0 428 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 ZDHHC3Q9NYG2 299 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 DKKL1Q9UK85 242 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 PIP5K1CO60331 668 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 RPS3AP61247 264 aaKnown RBP11.69□□□□□ -0.54
SRRM4-201ENST00000267260 ZNF169Q14929 603 aaPredicted RBP11.69□□□□□ -0.54
SRRM4-201ENST00000267260 RAB30Q15771 203 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 TMEM205Q6UW68 189 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 LILRB2Q8N423 598 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 NSMAFQ92636 917 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 DPF1Q92782 380 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 HOXB13Q92826 284 aaPredicted RBP11.69□□□□□ -0.54
SRRM4-201ENST00000267260 MYRFLQ96LU7 910 aa11.69□□□□□ -0.54
SRRM4-201ENST00000267260 TLX2O43763 284 aaPredicted RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 ABHD5Q8WTS1 349 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 PCDHAC1Q9H158 963 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 MRM3Q9HC36 420 aaKnown RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 GHRLQ9UBU3 117 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 C20orf202A1L168 122 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 CDC7O00311 574 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 BHLHE40O14503 412 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 CCL16O15467 120 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 PFKLP17858 780 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 SLC2A5P22732 501 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 SERPINF1P36955 418 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 LASP1Q14847 261 aaKnown RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 BRAT1Q6PJG6 821 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 LDB1Q86U70 411 aaPredicted RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 HAS1Q92839 578 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 COQ10AQ96MF6 247 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 TP63Q9H3D4 680 aaPredicted RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 EVLQ9UI08 416 aaPredicted RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 CD84Q9UIB8 345 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 ZNF318Q5VUA4 2279 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 A0A0A6YYH2 397 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 A6NJ64 397 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 WNT9AO14904 365 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 TRAPPC6AO75865 159 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 FUT4P22083 530 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 RHBDL3P58872 404 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 PSPHP78330 225 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 WDR45BQ5MNZ6 344 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 PGAP1Q75T13 922 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 PROKR1Q8TCW9 393 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 CGREF1Q99674 301 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 ADAMTS10Q9H324 1103 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 WDR6Q9NNW5 1121 aaKnown RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 KCNJ16Q9NPI9 418 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 WNT10BO00744 389 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 CREG1O75629 220 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 KLRK1P26718 216 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 CD34P28906 385 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 LRRC32Q14392 662 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 RNF151Q2KHN1 245 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 REEP3Q6NUK4 255 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 NIPAL3Q6P499 406 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 NFKBIDQ8NI38 313 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 ZNF599Q96NL3 588 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 P2RX7Q99572 595 aaKnown RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 RPF2Q9H7B2 306 aaKnown RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 AKTIPQ9H8T0 292 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 FNIP2Q9P278 1114 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 KLHL13Q9P2N7 655 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 ESPL1Q14674 2120 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 KLK3P07288 261 aaPredicted RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 ETFAP13804 333 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 CD52P31358 61 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 ENTPD1P49961 510 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 BDH1Q02338 343 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 SLBPQ14493 270 aaKnown RBP eCLIP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 VITQ6UXI7 678 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 MROQ9BYG7 248 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 METTL7AQ9H8H3 244 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 HES2Q9Y543 173 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 HEATR1Q9H583 2144 aaKnown RBP11.68□□□□□ -0.54
SRRM4-201ENST00000267260 EFCAB7A8K855 629 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 C9JVG2 144 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 M0R2N6 131 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 FPR1P21462 350 aa11.68□□□□□ -0.54
SRRM4-201ENST00000267260 TAS2R20P59543 309 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms