RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 TSEN54Q7Z6J9 526 aaKnown RBP8.41□□□□□ -1.06
VAPB-201ENST00000265619 SRFBP1Q8NEF9 429 aaKnown RBP8.41□□□□□ -1.06
VAPB-201ENST00000265619 UCN3Q969E3 161 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 FEVQ99581 238 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 GSX2Q9BZM3 304 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 MAGIXQ9H6Y5 334 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 PPP1R3EQ9H7J1 279 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 PLCXD1Q9NUJ7 323 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 C1orf109Q9NX04 203 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 RAB23Q9ULC3 237 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 MGAT4BQ9UQ53 548 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 RPH3AQ9Y2J0 694 aaPredicted RBP8.41□□□□□ -1.06
VAPB-201ENST00000265619 MYBPHLA2RUH7 354 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 GPR182O15218 404 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 NCAM2O15394 837 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 ADAMTS4O75173 837 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 TRIM3O75382 744 aaPredicted RBP8.41□□□□□ -1.06
VAPB-201ENST00000265619 SLC43A1O75387 559 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 GJB3O75712 270 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 NPPAP01160 153 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 ADRA1AP35348 466 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 HNF1BP35680 557 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 TSPAN7P41732 249 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 RBBP4Q09028 425 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 ABRAXAS2Q15018 415 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 SFRP5Q5T4F7 317 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 PDE12Q6L8Q7 609 aaKnown RBP8.41□□□□□ -1.06
VAPB-201ENST00000265619 IL27RAQ6UWB1 636 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 ASB18Q6ZVZ8 466 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 CALHM3Q86XJ0 350 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 NANPQ8TBE9 248 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 SLC25A46Q96AG3 418 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 EXOC2Q96KP1 924 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 IL20Q9NYY1 176 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 CHD5Q8TDI0 1954 aa8.41□□□□□ -1.06
VAPB-201ENST00000265619 IQCMA0A1B0GVH7 501 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 NPEPPSL1A6NEC2 478 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 MROH6A6NGR9 719 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 ZNF670-ZNF695F2Z2N8 137 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 CSO75390 466 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 HOXC13P31276 330 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 MATKP42679 507 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 HOXA1P49639 335 aaPredicted RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 CLCN5P51795 746 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 KIAA1024LP59773 190 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 NR6A1Q15406 480 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 MAPKAPK3Q16644 382 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 MPEG1Q2M385 716 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 COL28A1Q2UY09 1125 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 SLC25A52Q3SY17 297 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 KIAA0930Q6ICG6 404 aaPredicted RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 ZNF367Q7RTV3 350 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 FBXO39Q8N4B4 442 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 SLC5A8Q8N695 610 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 CLRN3Q8NCR9 226 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 HSD17B8Q92506 261 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 SMG7Q92540 1137 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 ZC3HAV1LQ96H79 300 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 MSLNLQ96KJ4 702 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 NFKBIZQ9BYH8 718 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 BEX1Q9HBH7 125 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 PRKAG2Q9UGJ0 569 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 PCTPQ9UKL6 214 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 LRFN2Q9ULH4 789 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 FAM50BQ9Y247 325 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 TRBV5-3A0A0A0MS03 114 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 A0A1W2PQ45 241 aaPredicted RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 A0A1W2PQY0 241 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 PRRG1O14668 218 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 MMP20O60882 483 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 FKTNO75072 461 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 MOCS2O96007 188 aaPredicted RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 IFNA7P01567 189 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 C9P02748 559 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 RPS17P08708 135 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 MRPL19P49406 292 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 MEOX2P50222 304 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 CRYBA2P53672 197 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 TPI1P60174 286 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 RPL38P63173 70 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 HMGCS1Q01581 520 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 CSTF1Q05048 431 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 CAMK2DQ13557 499 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 SMAD2Q15796 467 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 AP5B1Q2VPB7 878 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 SV2CQ496J9 727 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 KLHL12Q53G59 568 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 SUSD1Q6UWL2 747 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 RASSF6Q6ZTQ3 369 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 GPR155Q7Z3F1 870 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 TMEM132CQ8N3T6 1108 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 C19orf18Q8NEA5 215 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 OR9Q1Q8NGQ5 310 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 FAM120BQ96EK7 910 aaKnown RBP8.4□□□□□ -1.06
VAPB-201ENST00000265619 TMEM175Q9BSA9 504 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 TMEM168Q9H0V1 697 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 PIGUQ9H490 435 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 ZDHHC4Q9NPG8 344 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 GPR160Q9UJ42 338 aa8.4□□□□□ -1.06
VAPB-201ENST00000265619 BAIAP2Q9UQB8 552 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms