RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 GRM7Q14831 915 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 SLC9A5Q14940 896 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 KRT72Q14CN4 511 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 HERC3Q15034 1050 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 CLPPQ16740 277 aaPredicted RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 FAM174BQ3ZCQ3 159 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 TIGD2Q4W5G0 525 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 CDCP2Q5VXM1 449 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 OR4F3Q6IEY1 312 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 PWWP2BQ6NUJ5 590 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 RINLQ6ZS11 566 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 ZNF771Q7L3S4 317 aaPredicted RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 RETREG3Q86VR2 466 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 GPR135Q8IZ08 494 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 ZCCHC7Q8N3Z6 543 aaKnown RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 TTC29Q8NA56 475 aaPredicted RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 SLC38A9Q8NBW4 561 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 AGBL5Q8NDL9 886 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 RCN3Q96D15 328 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 MMABQ96EY8 250 aaPredicted RBP9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 SERINC2Q96SA4 455 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 CSF3RQ99062 836 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 RBCK1Q9BYM8 510 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 FANCEQ9HB96 536 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 ANKHQ9HCJ1 492 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 MYNNQ9NPC7 610 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 KCMF1Q9P0J7 381 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 TAGLN3Q9UI15 199 aa9.21□□□□□ -0.93
SNRNP40-201ENST00000263694 A0A1W2PNU3 283 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 A0A1W2PS29 197 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 OR2W5A6NFC9 320 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 CCDC154A6NI56 674 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ANKRD65E5RJM6 399 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 AIM2O14862 343 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SCAMP2O15127 329 aaKnown RBP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC22A2O15244 555 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 PROM1O43490 865 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 CHST10O43529 356 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SCELO95171 688 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 AIFM1O95831 613 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 NTRK1P04629 796 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 FURINP09958 794 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 MSL3P1P0C860 447 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 COX7A2P14406 83 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 PRPS1L1P21108 318 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ADSLP30566 484 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ETV5P41161 510 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ASMTP46597 345 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 GCGRP47871 477 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 HNRNPFP52597 415 aaKnown RBP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 KCNK10P57789 538 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ACY1Q03154 408 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 KLC1Q07866 573 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ILKQ13418 452 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 TRA2AQ13595 282 aaKnown RBP eCLIP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 NDUFA9Q16795 377 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ISXQ2M1V0 245 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 MPEG1Q2M385 716 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ZNF750Q32MQ0 723 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 PAGE3Q5JUK9 113 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 NDUFAF5Q5TEU4 345 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 HES3Q5TGS1 186 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC2A7Q6PXP3 512 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 GLRX5Q86SX6 157 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 GPR180Q86V85 440 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ANKRD46Q86W74 232 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 TICAM1Q8IUC6 712 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 CA13Q8N1Q1 262 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 BMPERQ8N8U9 685 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 FAM47BQ8NA70 645 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 TMEM52Q8NDY8 209 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 RP9Q8TA86 221 aaKnown RBP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 CIDECQ96AQ7 238 aaPredicted RBP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SPDL1Q96EA4 605 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ZBTB18Q99592 522 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 REEP4Q9H6H4 257 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 IL1RL2Q9HB29 575 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SH3BP4Q9P0V3 963 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SLAMF8Q9P0V8 285 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 RARRES3Q9UL19 164 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 FAM149AA5PLN7 773 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 B2RBV5 119 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 C8orf89P0DMQ9 161 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ZNF28P17035 718 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ITGAXP20702 1163 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 CPN2P22792 545 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 CCKBRP32239 447 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 S100A3P33764 101 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 PTGER1P34995 402 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 TSFMP43897 325 aaKnown RBP9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ARFIP1P53367 373 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 MAPK10P53779 464 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 WNT3P56703 355 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 FOXL2P58012 376 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SHC2P98077 582 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 SLC25A3Q00325 362 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 ID2Q02363 134 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 RCAN2Q14206 197 aa9.2□□□□□ -0.94
SNRNP40-201ENST00000263694 TLR1Q15399 786 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms