RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.72□□□□□ -1.01
MSH4-201ENST00000263187 CRIPAKQ8N1N5 446 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 C7orf57Q8NEG2 295 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 GPR151Q8TDV0 419 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 CHTF18Q8WVB6 975 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 EXOSC8Q96B26 276 aaKnown RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 ECHDC3Q96DC8 303 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 TRMT2BQ96GJ1 504 aaKnown RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 SMAD5Q99717 465 aaKnown RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 PSD2Q9BQI7 771 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 GABARAPL3Q9BY60 117 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 MMP28Q9H239 520 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 REEP4Q9H6H4 257 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 MALT1Q9UDY8 824 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 CARD8Q9Y2G2 431 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 TMEM98Q9Y2Y6 226 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 YARS2Q9Y2Z4 477 aaKnown RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 ANAPC1Q9H1A4 1944 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 TRAV19A0A0A6YYK7 116 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 PPM1DO15297 605 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 PRKRAO75569 313 aaKnown RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 GSTM1P09488 218 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 CLEC2LP0C7M8 214 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 TIMP2P16035 220 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 NPPBP16860 134 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 PCGF2P35227 344 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 RPS19P39019 145 aaKnown RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 DMPKQ09013 629 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 ZNF763Q0D2J5 394 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 FADDQ13158 208 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 NFE2L1Q14494 772 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 TBCEQ15813 527 aaPredicted RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 SPDYE7PQ495Y7 208 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 ANXA8L1Q5VT79 327 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 GRHL2Q6ISB3 625 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 SLCO4C1Q6ZQN7 724 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 LAX1Q8IWV1 398 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 TCEANCQ8N8B7 351 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 ZNF513Q8N8E2 541 aaPredicted RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 ZFP41Q8N8Y5 198 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 C16orf78Q8WTQ4 265 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 ZNF296Q8WUU4 475 aaPredicted RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 FOPNLQ96NB1 174 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 ZNF558Q96NG5 402 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 COL21A1Q96P44 957 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 DEFB118Q96PH6 123 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 HHIPQ96QV1 700 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 SIGLEC11Q96RL6 698 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 MCCC1Q96RQ3 725 aaPredicted RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 RSPO3Q9BXY4 272 aaPredicted RBP8.72□□□□□ -1.01
MSH4-201ENST00000263187 ABCB9Q9NP78 766 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 TOR4AQ9NXH8 423 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 TVP23BQ9NYZ1 205 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 MUTYHQ9UIF7 546 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 PADI2Q9Y2J8 665 aa8.72□□□□□ -1.01
MSH4-201ENST00000263187 SCN8AQ9UQD0 1980 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 C5orf58C9J3I9 102 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 ZNF197O14709 1029 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 FFAR1O14842 300 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 ATG13O75143 517 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 TNFRSF21O75509 655 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 C8AP07357 584 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 MPC1LP0DKB6 136 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 ACRP10323 421 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 UGT2B15P54855 530 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 CDC42P60953 191 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 RACK1P63244 317 aaKnown RBP8.71□□□□□ -1.01
MSH4-201ENST00000263187 PIN1Q13526 163 aaPredicted RBP8.71□□□□□ -1.01
MSH4-201ENST00000263187 PUM1Q14671 1186 aaKnown RBP eCLIP8.71□□□□□ -1.01
MSH4-201ENST00000263187 SSX1Q16384 188 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 TPGS2Q68CL5 300 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 DTX3Q8N9I9 347 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 OR5D16Q8NGK9 328 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 TRNT1Q96Q11 434 aaKnown RBP8.71□□□□□ -1.01
MSH4-201ENST00000263187 F2RL3Q96RI0 385 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 LYSMD1Q96S90 227 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 RETREG1Q9H6L5 497 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 CXorf36Q9H7Y0 433 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 KCNK12Q9HB15 430 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 GULP1Q9UBP9 304 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 ZNF282Q9UDV7 671 aaPredicted RBP8.71□□□□□ -1.01
MSH4-201ENST00000263187 POFUT2Q9Y2G5 429 aa8.71□□□□□ -1.01
MSH4-201ENST00000263187 PCYT1BQ9Y5K3 369 aaPredicted RBP8.71□□□□□ -1.01
MSH4-201ENST00000263187 PIPSLA2A3N6 862 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 GRM6O15303 877 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 SLCO2B1O94956 709 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 GNRH1P01148 92 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 PRPH2P23942 346 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 PSMB5P28074 263 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 TNFSF8P32971 234 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 OPRD1P41143 372 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 CASP3P42574 277 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 ASMTP46597 345 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 CCDC92Q53HC0 331 aaPredicted RBP8.71□□□□□ -1.02
MSH4-201ENST00000263187 HTR3DQ70Z44 454 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 GPR155Q7Z3F1 870 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 GALNT13Q8IUC8 556 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 CAMKK1Q8N5S9 505 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 HORMAD2Q8N7B1 307 aa8.71□□□□□ -1.02
MSH4-201ENST00000263187 KBTBD8Q8NFY9 601 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms