RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 CERS1P27544 350 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 BTN3A2P78410 334 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 EMX2Q04743 252 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 PTGR1Q14914 329 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 ISXQ2M1V0 245 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 TMEM53Q6P2H8 277 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 PDSS2Q86YH6 399 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 LIX1Q8N485 282 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 NRG4Q8WWG1 115 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 TMEM74Q96NL1 305 aa26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 COPG1Q9Y678 874 aaKnown RBP26.08■■□□□ 1.77
SMARCD3-201ENST00000262188 FCHO1O14526 889 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 SLC30A4O14863 429 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 PSMG1O95456 288 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 BCKDHAP12694 445 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 ITIH1P19827 911 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 SSR2P43308 183 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 OLR1P78380 273 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 INAQ16352 499 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 OR4C11Q6IEV9 310 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 OGFOD2Q6N063 350 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 CDV3Q9UKY7 258 aaKnown RBP26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 FAM149AA5PLN7 773 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 NPIPB8E9PQR5 432 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 PCDH7O60245 1069 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 SDC1P18827 310 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 TRA2AQ13595 282 aaKnown RBP eCLIP26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 TMEM35AQ53FP2 167 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 SPIN4Q56A73 249 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 TRIM40Q6P9F5 258 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 AGBL5Q8NDL9 886 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 GAL3ST3Q96A11 431 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 TSSK3Q96PN8 268 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 INIPQ9NRY2 104 aa26.07■■□□□ 1.76
SMARCD3-201ENST00000262188 HYKKA2RU49 373 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 TMPRSS11DO60235 418 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 SEMA3DO95025 777 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 TIA1P31483 386 aaKnown RBP eCLIP26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 CCKBRP32239 447 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 IQCF2Q8IXL9 164 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 MMP21Q8N119 569 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 OR9I1Q8NGQ6 314 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 OR9A4Q8NGU2 314 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 FNDC8Q8TC99 324 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 STMN2Q93045 179 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 TEX37Q96LM6 180 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 AIG1Q9NVV5 245 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 DHCR7Q9UBM7 475 aaKnown RBP26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 DCHS1Q96JQ0 3298 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 GNG14A0A1W2PPG7 69 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 DKK1O94907 266 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 ANXA4P09525 319 aaPredicted RBP26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 SMIM10L1P0DMW3 83 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 ITGA1P56199 1179 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 RSPO4Q2I0M5 234 aaPredicted RBP26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 BMPERQ8N8U9 685 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 ERP27Q96DN0 273 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 SMIM10Q96HG1 83 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 KCNC2Q96PR1 638 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 NLNQ9BYT8 704 aa26.06■■□□□ 1.76
SMARCD3-201ENST00000262188 A0A0A6YYC8 382 aaPredicted RBP26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 A0A1W2PNU3 283 aaPredicted RBP26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 I3L1I5 382 aaPredicted RBP26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 SGK494L7N484 410 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 LRATO95237 230 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 ALOX12P18054 663 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 LARP7Q4G0J3 582 aaKnown RBP eCLIP26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 CYP20A1Q6UW02 462 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 SPATA19Q7Z5L4 167 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 ACOT4Q8N9L9 421 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 OR5T3Q8NGG3 340 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 STON2Q8WXE9 905 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 ABTB1Q969K4 478 aaPredicted RBP26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 FCRL1Q96LA6 429 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 ZNF385DQ9H6B1 395 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 CLCA2Q9UQC9 943 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 NAALAD2Q9Y3Q0 740 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 GPR45Q9Y5Y3 372 aa26.05■■□□□ 1.76
SMARCD3-201ENST00000262188 CEACAM1P13688 526 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 ATP5A1P25705 553 aaKnown RBP26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 ETV5P41161 510 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 ACY1Q03154 408 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 TCTE1Q5JU00 501 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 CCNYL2Q5T2Q4 361 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 PWWP2BQ6NUJ5 590 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 PAOXQ6QHF9 649 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 KRTCAP2Q8N6L1 136 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 QRFPRQ96P65 431 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 ACTL8Q9H568 366 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 FANCEQ9HB96 536 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 SERTAD3Q9UJW9 196 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 EIF3LQ9Y262 564 aaKnown RBP26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 ZNF749O43361 778 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 FOXS1O43638 330 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 CCDC22O60826 627 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 MSL3P1P0C860 447 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 HIST1H1TP22492 207 aaPredicted RBP26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 UFM1P61960 85 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 TTLL10Q6ZVT0 673 aa26.04■■□□□ 1.76
SMARCD3-201ENST00000262188 NUDT13Q86X67 352 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms