RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 ZBTB11O95625 1053 aaPredicted RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 BCKDHAP12694 445 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 GSK3BP49841 420 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 RPS3AP61247 264 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 KCNC4Q03721 635 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 SIX1Q15475 284 aaPredicted RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 CDKN3Q16667 212 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 GRHL2Q6ISB3 625 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 ASB9Q96DX5 294 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 PRR11Q96HE9 360 aaPredicted RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 SERINC2Q96SA4 455 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 CD180Q99467 661 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 BCL2L14Q9BZR8 327 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 CXCL16Q9H2A7 254 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 GEMIN8Q9NWZ8 242 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 TAAR2Q9P1P5 351 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 PCDHGB1Q9Y5G3 927 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 CASKO14936 926 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 IL33O95760 270 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 TACSTD2P09758 323 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 CD27P26842 260 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 TUBB3Q13509 450 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH1-201ENST00000261769 UXS1Q8NBZ7 420 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 OR10H4Q8NGA5 316 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 FUBP1Q96AE4 644 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 CRELD1Q96HD1 420 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 C11orf16Q9NQ32 467 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 TRNAU1APQ9NX07 287 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 HHLA1C9JL84 531 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 NUAK1O60285 661 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 FAM189A1O60320 539 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 PRKD3O94806 890 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 RPL5P46777 297 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 SHC2P98077 582 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 TLR1Q15399 786 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 NPTX1Q15818 432 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 DEFB110Q30KQ9 67 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 TCEAL6Q6IPX3 200 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 TMEM214Q6NUQ4 689 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 NSUN5Q96P11 429 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 MRPS26Q9BYN8 205 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 OAS3Q9Y6K5 1087 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 AKAP11Q9UKA4 1901 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 CITO14578 2027 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 C17orf113A0A1B0GUU1 675 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 FAM92AA1XBS5 289 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 SLC30A4O14863 429 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 BRINP1O60477 761 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 DBTP11182 482 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 FGF3P11487 239 aaPredicted RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 ACADVLP49748 655 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 SF3B4Q15427 424 aaKnown RBP eCLIP13.35□□□□□ -0.27
CDH1-201ENST00000261769 OR2T5Q6IEZ7 315 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 MZT2BQ6NZ67 158 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 IKBIPQ70UQ0 350 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 PPP1R3BQ86XI6 285 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 ZNF440Q8IYI8 595 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 OR2T29Q8NH02 315 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 CD200R1Q8TD46 325 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 THAP3Q8WTV1 239 aaPredicted RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 MCHR1Q99705 422 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 SEC61A2Q9H9S3 476 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 EHD3Q9NZN3 535 aa13.35□□□□□ -0.27
CDH1-201ENST00000261769 RPL36Q9Y3U8 105 aaKnown RBP13.35□□□□□ -0.27
CDH1-201ENST00000261769 EGFP01133 1207 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 PGCP20142 388 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 RGRP47804 291 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 PRLHRP49683 370 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 PUM1Q14671 1186 aaKnown RBP eCLIP13.34□□□□□ -0.27
CDH1-201ENST00000261769 TRAM2Q15035 370 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 LAPTM4BQ86VI4 370 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 OR52E1Q8NGJ3 308 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 LINC01599Q8WXQ3 324 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 RAB8BQ92930 207 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 ARRDC3Q96B67 414 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 CHFRQ96EP1 664 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 RDH14Q9HBH5 336 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 SLC39A1Q9NY26 324 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 MCM8Q9UJA3 840 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 MAGP20916 626 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 SDR16C5Q8N3Y7 309 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 PROKR2Q8NFJ6 384 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 BHLHE41Q9C0J9 482 aaPredicted RBP13.34□□□□□ -0.27
CDH1-201ENST00000261769 A0A096LPI6 279 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 A0A1W2PRG6 482 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 ARPC2O15144 300 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 SCO2O43819 266 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 PRLP01236 227 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 MAGEA6P43360 314 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 CTBP2P56545 445 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 ANKRD26P1Q6NSI1 321 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 FAM180AQ6UWF9 173 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 ISCA2Q86U28 154 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 TRIM73Q86UV7 250 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 MCATQ8IVS2 390 aaKnown RBP13.34□□□□□ -0.27
CDH1-201ENST00000261769 ZNF433Q8N7K0 673 aaPredicted RBP13.34□□□□□ -0.27
CDH1-201ENST00000261769 ASB15Q8WXK1 588 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 ZSWIM3Q96MP5 696 aa13.34□□□□□ -0.27
CDH1-201ENST00000261769 NLGN3Q9NZ94 848 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms