RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 MED18Q9BUE0 208 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 FZD8Q9H461 694 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 METTL17Q9H7H0 456 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 APOBEC3GQ9HC16 384 aaKnown RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 AGO1Q9UL18 857 aaKnown RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 FPGTO14772 594 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 LAG3P18627 525 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 SLC6A4P31645 630 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 GKP32189 559 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 S100A3P33764 101 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 PBX3P40426 434 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 RAB13P51153 203 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 PDSS1Q5T2R2 415 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 AVPI1Q5T686 147 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 SLC25A25Q6KCM7 469 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 PAQR7Q86WK9 346 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 ZSWIM9Q86XI8 627 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 TCTE3Q8IZS6 198 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 OR56A4Q8NGH8 313 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 MAFIPQ8WZ33 124 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 TRMT61AQ96FX7 289 aaKnown RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 PCED1BQ96HM7 432 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 CSPG4P5Q96PW8 444 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 MRPL15Q9P015 296 aaKnown RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 MGAT4CQ9UBM8 478 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 CACNG4Q9UBN1 327 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 GPN3Q9UHW5 284 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 H3BQ06 376 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 MAPK8P45983 427 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF252P-AS1Q0IIN9 211 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 SPNS2Q8IVW8 549 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 NLGN4YQ8NFZ3 816 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 OR6S1Q8NH40 331 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 TMEM125Q96AQ2 219 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 FCRL3Q96P31 734 aaPredicted RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 GPR78Q96P69 363 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 GMLQ99445 158 aa12.51□□□□□ -0.41
TMEM260-201ENST00000261556 NOSIPQ9Y314 301 aaKnown RBP12.51□□□□□ -0.41
TMEM260-201ENST00000261556 LRIT2A6NDA9 550 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 OR5K4A6NMS3 321 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 SYPP08247 313 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 HPGDP15428 266 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 LMO2P25791 158 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 PSMA6P60900 246 aaKnown RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 SLC25A11Q02978 314 aaKnown RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 TLE2Q04725 743 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 ACSM2AQ08AH3 577 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 ACSM2BQ68CK6 577 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 PDE12Q6L8Q7 609 aaKnown RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 XYLT1Q86Y38 959 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 STAG3L4Q8TBR4 150 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 INTS12Q96CB8 462 aaKnown RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 ASB2Q96Q27 587 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 RBFOX1Q9NWB1 397 aaKnown RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 CFAP97Q9P2B7 532 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 GLYATL1P3A0A0U1RQE8 302 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 A0A1B0GV90 55 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 TRIM77I1YAP6 450 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 HOXD4P09016 255 aaPredicted RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 RPP30P78346 268 aaKnown RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 PTPRRQ15256 657 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 FAM174BQ3ZCQ3 159 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 INTS6LQ5JSJ4 861 aaKnown RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 KANK2Q63ZY3 851 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 ADGRG3Q86Y34 549 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 CMIPQ8IY22 773 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 PNPLA1Q8N8W4 532 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 CACNG6Q9BXT2 260 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 MFSD1Q9H3U5 465 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 AHSPQ9NZD4 102 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 ZNF225Q9UK10 706 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 PLEKHA6Q9Y2H5 1048 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 CACNG2Q9Y698 323 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 A0A1B0GVM2 712 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 TNFRSF11BO00300 401 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 DHX15O43143 795 aaKnown RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 SCELO95171 688 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 VNN2O95498 520 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 HTR1AP08908 422 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 CTSEP14091 401 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 EFNA1P20827 205 aaPredicted RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 ZP3P21754 424 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 CDH12P55289 794 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 ARHGAP1Q07960 439 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 MAD2L1BPQ15013 274 aaPredicted RBP12.5□□□□□ -0.41
TMEM260-201ENST00000261556 CHRNA6Q15825 494 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 CEP97Q8IW35 865 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 TMEM192Q8IY95 271 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 C10orf53Q8N6V4 93 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 PTP4A1Q93096 173 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 YIPF6Q96EC8 236 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 PPP1R16AQ96I34 528 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 BTN2A3PQ96KV6 586 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 BTBD1Q9H0C5 482 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 FLRT1Q9NZU1 646 aa12.5□□□□□ -0.41
TMEM260-201ENST00000261556 VPS4BO75351 444 aa12.49□□□□□ -0.41
TMEM260-201ENST00000261556 PTHP01270 115 aa12.49□□□□□ -0.41
TMEM260-201ENST00000261556 PTAFRP25105 342 aa12.49□□□□□ -0.41
TMEM260-201ENST00000261556 GPR1P46091 355 aa12.49□□□□□ -0.41
TMEM260-201ENST00000261556 ANXA11P50995 505 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms