RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 SSR3Q9UNL2 185 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 A0A1W2PQ72 361 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 TMEM88BA6NKF7 163 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 SCG5P05408 212 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 JUPP14923 745 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 IFNA8P32881 189 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 SDC2P34741 201 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 TUFMP49411 452 aaKnown RBP15.22■□□□□ 0.03
LMNB1-201ENST00000261366 PFN3P60673 137 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 TAF12Q16514 161 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 USP30Q70CQ3 517 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 GPR155Q7Z3F1 870 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 VN1R5Q7Z5H4 357 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 C7orf57Q8NEG2 295 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 C9orf43Q8TAL5 461 aaPredicted RBP15.22■□□□□ 0.03
LMNB1-201ENST00000261366 SETD6Q8TBK2 473 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 C1GALT1C1Q96EU7 318 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 MIXL1Q9H2W2 232 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 SLA2Q9H6Q3 261 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 TMEM161AQ9NX61 479 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 NLKQ9UBE8 527 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 RUVBL1Q9Y265 456 aaKnown RBP15.22■□□□□ 0.03
LMNB1-201ENST00000261366 HSPB11Q9Y547 144 aa15.22■□□□□ 0.03
LMNB1-201ENST00000261366 OR10H3O60404 316 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 IDSP22304 550 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 MAN2A2P49641 1150 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 GCNT6Q5T4J0 391 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 SAXO2Q658L1 398 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 PLET1Q6UQ28 207 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 TPGS1Q6ZTW0 290 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 MMP21Q8N119 569 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 VWA5B2Q8N398 1253 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 LILRA3Q8N6C8 439 aaPredicted RBP15.21■□□□□ 0.03
LMNB1-201ENST00000261366 L3MBTL4Q8NA19 623 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 DEDD2Q8WXF8 326 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 PIP5K1AQ99755 562 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 TM9SF2Q99805 663 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 SLC12A9Q9BXP2 914 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 CTPS2Q9NRF8 586 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 TVP23BQ9NYZ1 205 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 TRAPPC4Q9Y296 219 aa15.21■□□□□ 0.03
LMNB1-201ENST00000261366 MYL12BO14950 172 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 RPS13P62277 151 aaKnown RBP15.21■□□□□ 0.02
LMNB1-201ENST00000261366 RAE1P78406 368 aaKnown RBP15.21■□□□□ 0.02
LMNB1-201ENST00000261366 CDK6Q00534 326 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 MEF2AQ02078 507 aaPredicted RBP15.21■□□□□ 0.02
LMNB1-201ENST00000261366 DSC1Q08554 894 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 SLC5A12Q1EHB4 618 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 SDE2Q6IQ49 451 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 SHFQ7M4L6 423 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 TRIM63Q969Q1 353 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 HHIPQ96QV1 700 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 ZNF717Q9BY31 904 aaPredicted RBP15.21■□□□□ 0.02
LMNB1-201ENST00000261366 ACOXLQ9NUZ1 547 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 MAT2BQ9NZL9 334 aa15.21■□□□□ 0.02
LMNB1-201ENST00000261366 NDRG2Q9UN36 371 aaKnown RBP15.21■□□□□ 0.02
LMNB1-201ENST00000261366 SPIN1Q9Y657 262 aaPredicted RBP15.21■□□□□ 0.02
LMNB1-201ENST00000261366 ZNF840PA6NDX5 716 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 TMEM202A6NGA9 273 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 PLA2G10O15496 165 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 TNFRSF21O75509 655 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 SDHBP21912 280 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 UQCRC1P31930 480 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 SLC6A12P48065 614 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 PLD1Q13393 1074 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 TEAD4Q15561 434 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 OR2G6Q5TZ20 316 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 SIGIRRQ6IA17 410 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 DPY19L3Q6ZPD9 716 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 GRPEL2Q8TAA5 225 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 ASB11Q8WXH4 323 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 FADS2P1A8MWK0 482 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 SH3BP5O60239 455 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 SCO1O75880 301 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 C1SP09871 688 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 CSNK1DP48730 415 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 FAPQ12884 760 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 MRPL58Q14197 206 aaKnown RBP15.2■□□□□ 0.02
LMNB1-201ENST00000261366 WDR45BQ5MNZ6 344 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 ATAT1Q5SQI0 421 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 DEF8Q6ZN54 512 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 THOC6Q86W42 341 aaKnown RBP15.2■□□□□ 0.02
LMNB1-201ENST00000261366 RBM45Q8IUH3 476 aaKnown RBP15.2■□□□□ 0.02
LMNB1-201ENST00000261366 FAM46DQ8NEK8 389 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 PCNPQ8WW12 178 aaKnown RBP15.2■□□□□ 0.02
LMNB1-201ENST00000261366 KLHL6Q8WZ60 621 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 TSSK6Q9BXA6 273 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 FTSJ1Q9UET6 329 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 STUB1Q9UNE7 303 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 ALG5Q9Y673 324 aa15.2■□□□□ 0.02
LMNB1-201ENST00000261366 SCN10AQ9Y5Y9 1956 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 ZNF670-ZNF695F2Z2N8 137 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 TLX2O43763 284 aaPredicted RBP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 ZNF780AO75290 641 aaPredicted RBP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 NCR1O76036 304 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 ZDHHC11BP0C7U3 371 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 PREPP48147 710 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 STK19P49842 368 aaPredicted RBP15.19■□□□□ 0.02
LMNB1-201ENST00000261366 MVDP53602 400 aa15.19■□□□□ 0.02
LMNB1-201ENST00000261366 ALDH6A1Q02252 535 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms