RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 ASGR1P07306 291 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF35P13682 527 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 RAB8AP61006 207 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 SF3B4Q15427 424 aaKnown RBP eCLIP9.4□□□□□ -0.913e-15■■■■□ 20.1
CTDSPL2-201ENST00000260327 CHST9Q7L1S5 443 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 RBM23Q86U06 439 aaKnown RBP9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 PHYKPLQ8IUZ5 450 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 SPARTQ8N0X7 666 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR4K1Q8NGD4 311 aa9.4□□□□□ -0.91
CTDSPL2-201ENST00000260327 ANKRD66B4E2M5 251 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 ARPC5O15511 151 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 RFPL3O75679 317 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 DNAJB1P25685 340 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CDKN2DP55273 166 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CEACAM19Q7Z692 300 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 TMEM135Q86UB9 458 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 QPCTLQ9NXS2 382 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 IL32P24001 234 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 DGKGP49619 791 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 BATFQ16520 125 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 BCL7AQ4VC05 210 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 COMTD1Q86VU5 262 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF101Q8IZC7 436 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR8D1Q8WZ84 308 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 RAB8BQ92930 207 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 PCYT2Q99447 389 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 BCL7BQ9BQE9 202 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 C1orf196B1AJZ1 125 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 GPR89AB7ZAQ6 455 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 G3V2L1 256 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CCL16O15467 120 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 GPR89BP0CG08 455 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 PROZP22891 400 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 WASP42768 502 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 C1QTNF8P60827 252 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 SHFQ7M4L6 423 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 FAM124AQ86V42 546 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 SLC30A8Q8IWU4 369 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 MTMR14Q8NCE2 650 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CHDHQ8NE62 594 aaPredicted RBP9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CRTAC1Q9NQ79 661 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 BIN3Q9NQY0 253 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CD1DP15813 335 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF823P16415 610 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 KELP23276 732 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CASP3P42574 277 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CHAF1BQ13112 559 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 GRIN2CQ14957 1233 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 ARSKQ6UWY0 536 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CARM1Q86X55 608 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 NPAS3Q8IXF0 933 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 MINDY1Q8N5J2 469 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 TSPEARQ8WU66 669 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 TFAP2CQ92754 450 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 SYT11Q9BT88 431 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 ADAP2Q9NPF8 381 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CD300AQ9UGN4 299 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 MAGED1Q9Y5V3 778 aaPredicted RBP9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CDH10Q9Y6N8 788 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 IRS2Q9Y4H2 1338 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 COQ9O75208 318 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 ALDOBP05062 364 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 ELNP15502 786 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 ACVR1BP36896 505 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 TICAM1Q8IUC6 712 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 BEST3Q8N1M1 668 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR8J3Q8NGG0 315 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 MRGPRX2Q96LB1 330 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 SECISBP2Q96T21 854 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 PARPBPQ9NWS1 579 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 INTS6Q9UL03 887 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 POP4O95707 220 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 MT-ND5P03915 603 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 SFTPBP07988 381 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 TACSTD2P09758 323 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 MS4A13Q5J8X5 152 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 AGAP6Q5VW22 663 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 KANK2Q63ZY3 851 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 STEAP4Q687X5 459 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 LCN8Q6JVE9 175 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 TSPAN33Q86UF1 283 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 KLBQ86Z14 1044 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 AGAP4Q96P64 663 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 OR4K3Q96R72 315 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 SORT1Q99523 831 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 PPA2Q9H2U2 334 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 CCDC86Q9H6F5 360 aaKnown RBP9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 ZNF225Q9UK10 706 aa9.39□□□□□ -0.91
CTDSPL2-201ENST00000260327 A0A0D9SEW6 157 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 CDK5R2Q13319 367 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 TMEM69Q5SWH9 247 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 NDUFAF5Q5TEU4 345 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 PRSS48Q7RTY5 328 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 THEM6Q8WUY1 208 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 LMLNQ96KR4 655 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 CAMK1GQ96NX5 476 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 SLC6A7Q99884 636 aa9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 MARCH4Q9P2E8 410 aaPredicted RBP9.38□□□□□ -0.91
CTDSPL2-201ENST00000260327 E7EQ34 232 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms