RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 ELFN1P0C7U0 828 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 TIE1P35590 1138 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 MMP12P39900 470 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 NSG1P42857 185 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 UGT2B15P54855 530 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 OR8J2Q8NGG1 315 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 FEVQ99581 238 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 CHCHD6Q9BRQ6 235 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 SPATA9Q9BWV2 254 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 FAM83DQ9H4H8 585 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 PRSS16Q9NQE7 514 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 QPCTLQ9NXS2 382 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 LYVE1Q9Y5Y7 322 aa16.25■□□□□ 0.19
FOXA1-201ENST00000250448 SERTM1A2A2V5 107 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 TNFRSF11BO00300 401 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 PTHP01270 115 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 PRNPP04156 253 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 AQP1P29972 269 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 CCR7P32248 378 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 DEFA1P59665 94 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 DEFA3P59666 94 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 ELAVL3Q14576 367 aaKnown RBP16.24■□□□□ 0.19
FOXA1-201ENST00000250448 C2orf27AQ580R0 203 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 ARMCX4Q5H9R4 360 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 IER5LQ5T953 404 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 LIPIQ6XZB0 460 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 GDPD3Q7L5L3 318 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 STX19Q8N4C7 294 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 SMRP1Q8NCR6 262 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 Q96MT0 163 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 COPS8Q99627 209 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 CHST8Q9H2A9 424 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 TPK1Q9H3S4 243 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 TMEM184CQ9NVA4 438 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 DNAJC11Q9NVH1 559 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 FZD4Q9ULV1 537 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 PRELID1Q9Y255 219 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 TSPAN11A1L157 253 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 FADS2P1A8MWK0 482 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 YY2O15391 372 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 ITPKAP23677 461 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 IDH2P48735 452 aaKnown RBP16.24■□□□□ 0.19
FOXA1-201ENST00000250448 TSEN54Q7Z6J9 526 aaKnown RBP16.24■□□□□ 0.19
FOXA1-201ENST00000250448 OR10G2Q8NGC3 310 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 SKA2Q8WVK7 121 aaPredicted RBP16.24■□□□□ 0.19
FOXA1-201ENST00000250448 SH3KBP1Q96B97 665 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 SLC12A9Q9BXP2 914 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 NEK6Q9HC98 313 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 ITM2CQ9NQX7 267 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 KLHL42Q9P2K6 505 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 NUMA1Q14980 2115 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 KMOO15229 486 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 C8GP07360 202 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 LAMP1P11279 417 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 RGS6P49758 472 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 LIMK1P53667 647 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 C6orf183Q5T699 404 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.24■□□□□ 0.19
FOXA1-201ENST00000250448 ZNF605Q86T29 641 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 SLC5A8Q8N695 610 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 CELF2-AS1Q8N7Q2 184 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 DOHHQ9BU89 302 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 TP63Q9H3D4 680 aaPredicted RBP16.24■□□□□ 0.19
FOXA1-201ENST00000250448 ZDHHC3Q9NYG2 299 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 ZNF226Q9NYT6 803 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 THAP10Q9P2Z0 257 aaPredicted RBP16.24■□□□□ 0.19
FOXA1-201ENST00000250448 SLC22A14Q9Y267 594 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 PCDHGA2Q9Y5H1 932 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 DOCK9Q9BZ29 2069 aa16.24■□□□□ 0.19
FOXA1-201ENST00000250448 MMP20O60882 483 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 APODP05090 189 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 HIST1H2AGP0C0S8 130 aaPredicted RBP16.23■□□□□ 0.19
FOXA1-201ENST00000250448 JUPP14923 745 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 HIST1H2ADP20671 130 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 PCGF2P35227 344 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 TEKQ02763 1124 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 CSTF3Q12996 717 aaKnown RBP16.23■□□□□ 0.19
FOXA1-201ENST00000250448 CHIT1Q13231 466 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.23■□□□□ 0.19
FOXA1-201ENST00000250448 C10orf62Q5T681 223 aaPredicted RBP16.23■□□□□ 0.19
FOXA1-201ENST00000250448 RSBN1Q5VWQ0 802 aaPredicted RBP16.23■□□□□ 0.19
FOXA1-201ENST00000250448 DPPA4Q7L190 304 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 ANKK1Q8NFD2 765 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 SPPL2AQ8TCT8 520 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 HIST1H2AHQ96KK5 128 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 HIST1H2AJQ99878 128 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 H2AFJQ9BTM1 129 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 DKK3Q9UBP4 350 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 POFUT2Q9Y2G5 429 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 STON1Q9Y6Q2 735 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 LRRK1Q38SD2 2015 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 A0A1W2PQ67 120 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 AGAP14A8MT82 685 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 TMEM229AB2RXF0 380 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 K7ESM1 405 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 RGS13O14921 159 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 ADAMDEC1O15204 470 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 APOA1P02647 267 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 ETV6P41212 452 aa16.23■□□□□ 0.19
FOXA1-201ENST00000250448 HNMTP50135 292 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms