RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 CAMKK1Q8N5S9 505 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 APOBEC4Q8WW27 367 aaKnown RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 IRF7Q92985 503 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 WRAP53Q9BUR4 548 aaKnown RBP9.68□□□□□ -0.86
COPB1-201ENST00000249923 NEK6Q9HC98 313 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 SLAMF7Q9NQ25 335 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 WNT6Q9Y6F9 365 aa9.68□□□□□ -0.86
COPB1-201ENST00000249923 MUC22E2RYF6 1773 aaPredicted RBP9.67□□□□□ -0.86
COPB1-201ENST00000249923 GNG14A0A1W2PPG7 69 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 CLDN24A6NM45 220 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 B4GALT2O60909 372 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 FGF18O76093 207 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 AP2A2O94973 939 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 HOXB6P17509 224 aaKnown RBP9.67□□□□□ -0.86
COPB1-201ENST00000249923 EIF2DP41214 584 aaKnown RBP9.67□□□□□ -0.86
COPB1-201ENST00000249923 HNF4AP41235 474 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 CDH12P55289 794 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 RAB15P59190 212 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 WDR5P61964 334 aaKnown RBP9.67□□□□□ -0.86
COPB1-201ENST00000249923 NTHL1P78549 312 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 PUM1Q14671 1186 aaKnown RBP eCLIP9.67□□□□□ -0.86
COPB1-201ENST00000249923 RNF130Q86XS8 419 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 GFM1Q96RP9 751 aaKnown RBP9.67□□□□□ -0.86
COPB1-201ENST00000249923 SLC35A5Q9BS91 424 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 RHCGQ9UBD6 479 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 ATP6V1HQ9UI12 483 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 KLHL20Q9Y2M5 609 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 UGT2A1Q9Y4X1 527 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 GUCY1B2O75343 617 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 TRIOO75962 3097 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 STSP08842 583 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 ADORA3P0DMS8 318 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 CD40LGP29965 261 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 PCBP3P57721 371 aaKnown RBP9.67□□□□□ -0.86
COPB1-201ENST00000249923 DEFA1P59665 94 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 DEFA3P59666 94 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 DUSP7Q16829 419 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 DESI1Q6ICB0 168 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 TMEM220Q6QAJ8 160 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 SPRED2Q7Z698 418 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 VPS35Q96QK1 796 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 CENPOQ9BU64 300 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 ZSCAN5AQ9BUG6 496 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 ZNF717Q9BY31 904 aaPredicted RBP9.67□□□□□ -0.86
COPB1-201ENST00000249923 OR51E2Q9H255 320 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 DMRT3Q9NQL9 472 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 SPHK2Q9NRA0 654 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 ACER3Q9NUN7 267 aa9.67□□□□□ -0.86
COPB1-201ENST00000249923 DOCK9Q9BZ29 2069 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 CENPXA8MT69 81 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 TNFRSF11BO00300 401 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 MED26O95402 600 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 LRG1P02750 347 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 HSD3B1P14060 373 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 HSD3B2P26439 372 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 ERVFC1P60507 584 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 ZNF33BQ06732 778 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 SLBPQ14493 270 aaKnown RBP eCLIP9.66□□□□□ -0.86
COPB1-201ENST00000249923 TCEAL5Q5H9L2 206 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 DEPDC1Q5TB30 811 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 ZNF770Q6IQ21 691 aaPredicted RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 KLHL17Q6TDP4 642 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 CCBE1Q6UXH8 406 aaPredicted RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 DPPA4Q7L190 304 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 COMTD1Q86VU5 262 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 ADGRF3Q8IZF5 1079 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 CELF2-AS1Q8N7Q2 184 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 DTX3Q8N9I9 347 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 OR10G2Q8NGC3 310 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 TMEM159Q96B96 161 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 CDADC1Q9BWV3 514 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 ITPAQ9BY32 194 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 TIGARQ9NQ88 270 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 NFKBIL1Q9UBC1 381 aaPredicted RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 MAP4K5Q9Y4K4 846 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 PCDHGB3Q9Y5G1 929 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 NOX1Q9Y5S8 564 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 PIPSLA2A3N6 862 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 METTL15A6NJ78 407 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 TLL1O43897 1013 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 CDK1P06493 297 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 IGFBP1P08833 259 aaPredicted RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 IRS1P35568 1242 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 LIM2P55344 173 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 SNRPD2P62316 118 aaKnown RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 RPS26P62854 115 aaKnown RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 TAP2Q03519 686 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 ZNF763Q0D2J5 394 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 IRF3Q14653 427 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 GANABQ14697 944 aaKnown RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 ZFP69Q49AA0 526 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 SYTL3Q4VX76 610 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 SPIN4Q56A73 249 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 MLIPQ5VWP3 458 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 FAM71E1Q6IPT2 247 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 PLEKHG7Q6ZR37 379 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 FAM83HQ6ZRV2 1179 aaPredicted RBP9.66□□□□□ -0.86
COPB1-201ENST00000249923 LAS2Q8IYD9 372 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 C11orf65Q8NCR3 313 aa9.66□□□□□ -0.86
COPB1-201ENST00000249923 KREMEN2Q8NCW0 462 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms