RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 PCDHB3Q9Y5E6 796 aa17.78■□□□□ 0.44
TNFSF9-201ENST00000245817 TLCD2A6NGC4 264 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 PDPK1O15530 556 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 DUX1O43812 170 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 C6orf47O95873 294 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 ANPEPP15144 967 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 ENGP17813 658 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 PTPN6P29350 595 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 SOX11P35716 441 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 SESN3P58005 492 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 PTRH1Q86Y79 214 aaKnown RBP17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 ZNF764Q96H86 408 aaPredicted RBP17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 SERINC2Q96SA4 455 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 GAREM1Q9H706 876 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 KAT8Q9H7Z6 458 aaKnown RBP17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 SOHLH2Q9NX45 425 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 EHD3Q9NZN3 535 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 EPHA6Q9UF33 1036 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 MAGEL2Q9UJ55 1249 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 NEUROG3Q9Y4Z2 214 aa17.77■□□□□ 0.44
TNFSF9-201ENST00000245817 C1orf226A1L170 272 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 C4orf51C9J302 202 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 ARPC2O15144 300 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 P2RX6O15547 441 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 B3GALT2O43825 422 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 MLLT3P42568 568 aaPredicted RBP17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 MANFP55145 182 aaKnown RBP17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 OR1D5P58170 312 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 GPLD1P80108 840 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 RHDQ02161 417 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 NKAIN2Q5VXU1 208 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 MRM1Q6IN84 353 aaKnown RBP17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 LCN8Q6JVE9 175 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 ZC3H14Q6PJT7 736 aaKnown RBP17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 GATAD2AQ86YP4 633 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 SPPL2CQ8IUH8 684 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 PLXDC1Q8IUK5 500 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 MCATQ8IVS2 390 aaKnown RBP17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 OR6C4Q8NGE1 309 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 N4BP2L2Q92802 583 aaPredicted RBP17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 EXOSC8Q96B26 276 aaKnown RBP17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 ZBED6CLQ96FA7 236 aaPredicted RBP17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 ZNF583Q96ND8 569 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 PHF12Q96QT6 1004 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 TPT1P8Q9HAU6 139 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 TAS2R9Q9NYW1 312 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 ASB4Q9Y574 426 aa17.77■□□□□ 0.43
TNFSF9-201ENST00000245817 ELOVL7A1L3X0 281 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 AQP12BA6NM10 295 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 SRPX2O60687 465 aaPredicted RBP17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 SCELO95171 688 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 GIMD1P0DJR0 217 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 HOXB9P17482 250 aaPredicted RBP17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 ALOX12P18054 663 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 HBA1P69905 142 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 ABHD18Q0P651 414 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 AMZ1Q400G9 498 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 DEFB134Q4QY38 66 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 GLYATQ6IB77 296 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 AQP12AQ8IXF9 295 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 Q8N9G6 341 aaPredicted RBP17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 GOT1L1Q8NHS2 421 aaPredicted RBP17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 EFHD1Q9BUP0 239 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 IKZF5Q9H5V7 419 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 FAM60AQ9NP50 221 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 FSCN3Q9NQT6 498 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 PHF11Q9UIL8 331 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 UTS2RQ9UKP6 389 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 SLC6A14Q9UN76 642 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 CACNA1HO95180 2353 aa17.76■□□□□ 0.43
TNFSF9-201ENST00000245817 IGHV1OR21-1A0A087WYE8 117 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 FAM220BPB1ANY3 271 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 SH3BP5O60239 455 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 CER1O95813 267 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 C8BP07358 591 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 SYPP08247 313 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 SMIM10L1P0DMW3 83 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 NTSP30990 170 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 TLX1P31314 330 aaPredicted RBP17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 BUD31P41223 144 aaPredicted RBP17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 ARL4DP49703 201 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 CCT8P50990 548 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 OR4D2P58180 307 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 NR0B2Q15466 257 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 CYP51A1Q16850 503 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 MPEG1Q2M385 716 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 TRIM61Q5EBN2 209 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 ANGPTL8Q6UXH0 198 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 SAP25Q8TEE9 199 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 OR5P2Q8WZ92 322 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 SMIM10Q96HG1 83 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 IRF2BPLQ9H1B7 796 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 PDE7BQ9NP56 450 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 GIMAP4Q9NUV9 329 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 IRAK4Q9NWZ3 460 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 TAS2R7Q9NYW3 318 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 KLHL3Q9UH77 587 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 PSME2Q9UL46 239 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 ATG4BQ9Y4P1 393 aa17.75■□□□□ 0.43
TNFSF9-201ENST00000245817 SPACA6W5XKT8 324 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms