RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 CMPK2Q5EBM0 449 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 RBM20Q5T481 1227 aaKnown RBP12.9□□□□□ -0.34
DDX39A-201ENST00000242776 MROH9Q5TGP6 573 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 TMEM214Q6NUQ4 689 aaKnown RBP12.9□□□□□ -0.34
DDX39A-201ENST00000242776 ZNF549Q6P9A3 640 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 CCDC91Q7Z6B0 441 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 CHDHQ8NE62 594 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-201ENST00000242776 OR5M9Q8NGP3 310 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 OR5M3Q8NGP4 307 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 STMN4Q9H169 189 aaPredicted RBP12.9□□□□□ -0.34
DDX39A-201ENST00000242776 POPDC3Q9HBV1 291 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 LGALS13Q9UHV8 139 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 TRMT6Q9UJA5 497 aaKnown RBP12.9□□□□□ -0.34
DDX39A-201ENST00000242776 PLEKHA6Q9Y2H5 1048 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 MTO1Q9Y2Z2 717 aaKnown RBP12.9□□□□□ -0.34
DDX39A-201ENST00000242776 VWA7Q9Y334 891 aa12.9□□□□□ -0.34
DDX39A-201ENST00000242776 TRIM49D1C9J1S8 452 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 RGS16O15492 202 aaPredicted RBP12.89□□□□□ -0.35
DDX39A-201ENST00000242776 PEX1O43933 1283 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 HOXD4P09016 255 aaPredicted RBP12.89□□□□□ -0.35
DDX39A-201ENST00000242776 MYZAPP0CAP1 466 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 KRT15P19012 456 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 SAT1P21673 171 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 SKIV2L2P42285 1042 aaKnown RBP12.89□□□□□ -0.35
DDX39A-201ENST00000242776 RPS15AP62244 130 aaKnown RBP12.89□□□□□ -0.35
DDX39A-201ENST00000242776 ZZZ3Q8IYH5 903 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 GOLGA6L1Q8N7Z2 621 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 ELP5Q8TE02 316 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 POLDIP3Q9BY77 421 aaKnown RBP12.89□□□□□ -0.35
DDX39A-201ENST00000242776 LANCL2Q9NS86 450 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 KLHL42Q9P2K6 505 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 CTNNAL1Q9UBT7 734 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 KCNN3Q9UGI6 736 aa12.89□□□□□ -0.35
DDX39A-201ENST00000242776 KLF13Q9Y2Y9 288 aaPredicted RBP12.89□□□□□ -0.35
DDX39A-201ENST00000242776 FAM166BA8MTA8 275 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 MAGEB17A8MXT2 336 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 NPIPA2E9PIF3 369 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 NPIPA3F8WFD2 350 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 ATP8B1O43520 1251 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 LCMT2O60294 686 aaKnown RBP12.88□□□□□ -0.35
DDX39A-201ENST00000242776 SERPIND1P05546 499 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 CYC1P08574 325 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 CRABP2P29373 138 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 HSD17B2P37059 387 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 HLCSP50747 726 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 MLF1P58340 268 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 RAB10P61026 200 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 BTG2P78543 158 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 FOLH1Q04609 750 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 LRRC8EQ6NSJ5 796 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 RAPH1Q70E73 1250 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 ASPGQ86U10 573 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 CAMKVQ8NCB2 501 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 PLPP5Q8NEB5 264 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 SLC13A3Q8WWT9 602 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 ISL2Q96A47 359 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 PTCHD1Q96NR3 888 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 GPR21Q99679 349 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 FOXC2Q99958 501 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 GPATCH1Q9BRR8 931 aaKnown RBP12.88□□□□□ -0.35
DDX39A-201ENST00000242776 RHBGQ9H310 441 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 TP63Q9H3D4 680 aaPredicted RBP12.88□□□□□ -0.35
DDX39A-201ENST00000242776 CENPHQ9H3R5 247 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 TMEM184CQ9NVA4 438 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 DHRS7Q9Y394 339 aa12.88□□□□□ -0.35
DDX39A-201ENST00000242776 DNHD1Q96M86 4753 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 KLRC4-KLRK1H3BQV0 150 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 FCHO1O14526 889 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 FHP07954 510 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 MAOAP21397 527 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 IMPA1P29218 277 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 TYK2P29597 1187 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 RGS4P49798 205 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 CDKN2DP55273 166 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 TAS2R39P59534 338 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 TBPL1P62380 186 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 MEF2AQ02078 507 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-201ENST00000242776 ZKSCAN8Q15776 578 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-201ENST00000242776 EMC4Q5J8M3 183 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 ZNF585AQ6P3V2 769 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 MBOAT1Q6ZNC8 495 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 TIFABQ6ZNK6 161 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 MDGA2Q7Z553 956 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 LRRC56Q8IYG6 542 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-201ENST00000242776 LGI4Q8N135 537 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 FBXO15Q8NCQ5 510 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-201ENST00000242776 GIMAP7Q8NHV1 300 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 SMR3AQ99954 134 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 DEFB126Q9BYW3 111 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 CCDC177Q9NQR7 707 aaPredicted RBP12.87□□□□□ -0.35
DDX39A-201ENST00000242776 SNX15Q9NRS6 342 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 PNPLA3Q9NST1 481 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 SENP1Q9P0U3 644 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 ABCA2Q9BZC7 2435 aa12.87□□□□□ -0.35
DDX39A-201ENST00000242776 A0A087X1B8 175 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 TRBV11-1A0A0K0K1C0 115 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 PINLYPA6NC86 204 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 EIF3FO00303 357 aaPredicted RBP12.86□□□□□ -0.35
DDX39A-201ENST00000242776 KLK8O60259 260 aa12.86□□□□□ -0.35
DDX39A-201ENST00000242776 ENO3P13929 434 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms