RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 OR10G2Q8NGC3 310 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 OR5AK3PQ8NH89 298 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 APH1BQ8WW43 257 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 BORCS5Q969J3 196 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 MYOCQ99972 504 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 WDR26Q9H7D7 661 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 NEUROD4Q9HD90 331 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 LHX9Q9NQ69 397 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 PLCXD1Q9NUJ7 323 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 TESMINQ9Y4I5 508 aa15.42■□□□□ 0.06
UBE3D-201ENST00000237186 H7BY64 318 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 KCNJ13O60928 360 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 SLC35G4P0C7Q5 338 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 GGT2P36268 569 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 MAGEA10P43363 369 aaPredicted RBP15.41■□□□□ 0.06
UBE3D-201ENST00000237186 CLCNKAP51800 687 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 DSTNP60981 165 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 TRA2BP62995 288 aaKnown RBP15.41■□□□□ 0.06
UBE3D-201ENST00000237186 AQP6Q13520 282 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 REEP3Q6NUK4 255 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 LINC00299Q6ZSB3 139 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 RAB42Q8N4Z0 105 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 SLC5A8Q8N695 610 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 LINC01555Q8NAE3 123 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 ZNF540Q8NDQ6 660 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 PSMA8Q8TAA3 256 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 FNDC8Q8TC99 324 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 YIPF6Q96EC8 236 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 PRAP1Q96NZ9 151 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 TIMM29Q9BSF4 260 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 LMAN2LQ9H0V9 348 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 A4GALTQ9NPC4 353 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 SLAMF7Q9NQ25 335 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 TAS2R7Q9NYW3 318 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 AASSQ9UDR5 926 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 POFUT2Q9Y2G5 429 aa15.41■□□□□ 0.06
UBE3D-201ENST00000237186 PRAMEF33A0A0G2JMD5 474 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 PRR19A6NJB7 356 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 PRAMEF10O60809 474 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 APODP05090 189 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 RHCEP18577 417 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 TNFRSF1BP20333 461 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 SOAT1P35610 550 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 KRT20P35900 424 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 OR1E2P47887 323 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 CSNK1G2P78368 415 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 MLC1Q15049 377 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 NUDT13Q86X67 352 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 HDDC3Q8N4P3 179 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 TP53I13Q8NBR0 393 aaPredicted RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 RHOXF1Q8NHV9 184 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 RGMAQ96B86 450 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 CDCA3Q99618 268 aaPredicted RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 NRTNQ99748 197 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 PIP5K1AQ99755 562 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 PLA2G2FQ9BZM2 168 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 PALMDQ9NP74 551 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 ACER3Q9NUN7 267 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 ZFR2Q9UPR6 939 aaKnown RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 PCDHGA2Q9Y5H1 932 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 CFAP20Q9Y6A4 193 aaKnown RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 ENPP4Q9Y6X5 453 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 COL4A3Q01955 1670 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 ARRDC5A6NEK1 342 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 RTCAO00442 366 aaKnown RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 PDPK1O15530 556 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 CLEC3AO75596 197 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 CLPXO76031 633 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 MT-ND2P03891 347 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 FUCA1P04066 466 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 MASP1P48740 699 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 GALK1P51570 392 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 MAPK10P53779 464 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 MANFP55145 182 aaKnown RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 KCNC4Q03721 635 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 PRDX1Q06830 199 aaKnown RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 CLCA4Q14CN2 919 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 IRF4Q15306 451 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 SMN1Q16637 294 aaKnown RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 B4GALNT2Q8NHY0 566 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 EZH1Q92800 747 aaPredicted RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 UBE2FQ969M7 185 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 FAM131CQ96AQ9 280 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 INSM2Q96T92 566 aaPredicted RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 C1QTNF2Q9BXJ5 285 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 DDX31Q9H8H2 851 aaKnown RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 RMI1Q9H9A7 625 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 ACOT13Q9NPJ3 140 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 NECTIN3Q9NQS3 549 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 PHPT1Q9NRX4 125 aaPredicted RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 ACSS1Q9NUB1 689 aaPredicted RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 RNF6Q9Y252 685 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 WDR37Q9Y2I8 494 aa15.4■□□□□ 0.06
UBE3D-201ENST00000237186 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.4■□□□□ 0.06
UBE3D-201ENST00000237186 TRBC2A0A5B9 178 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 SLC22A1O15245 554 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 FOXD2O60548 495 aaPredicted RBP15.39■□□□□ 0.05
UBE3D-201ENST00000237186 FAM20BO75063 409 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 RECKO95980 971 aa15.39■□□□□ 0.05
UBE3D-201ENST00000237186 CDH12P55289 794 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms