RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TAS2R41P59536 307 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 C1orf220Q5T0J3 134 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 NAA40Q86UY6 237 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 LURAP1LQ8IV03 231 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 HS6ST3Q8IZP7 471 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 MS4A15Q8N5U1 240 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 ADAMTS14Q8WXS8 1223 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 PTP4A1Q93096 173 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF599Q96NL3 588 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 EPYCQ99645 322 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 HEBP1Q9NRV9 189 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 FBXL2Q9UKC9 423 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 NOP16Q9Y3C1 178 aaKnown RBP12.4□□□□□ -0.42
VAMP4-201ENST00000236192 ARL6IP5O75915 188 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 ADRA1BP35368 520 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 FBXO47Q5MNV8 452 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 ZNF529Q6P280 563 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 CHAC2Q8WUX2 184 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 S100A16Q96FQ6 103 aaKnown RBP12.4□□□□□ -0.42
VAMP4-201ENST00000236192 AMBRA1Q9C0C7 1298 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 ARNT2Q9HBZ2 717 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 MRM3Q9HC36 420 aaKnown RBP12.4□□□□□ -0.42
VAMP4-201ENST00000236192 RPS6KB2Q9UBS0 482 aa12.4□□□□□ -0.42
VAMP4-201ENST00000236192 IQCMA0A1B0GVH7 501 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 AIPO00170 330 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 PTHP01270 115 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 CELP19835 753 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 CLCN3P51790 818 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 OLIG2Q13516 323 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 TRAM1Q15629 374 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 UGCGQ16739 394 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 TOR1AIP1Q5JTV8 583 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 SPATA2LQ8IUW3 424 aaPredicted RBP12.4□□□□□ -0.43
VAMP4-201ENST00000236192 PIGMQ9H3S5 423 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 FLRT1Q9NZU1 646 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 GALPQ9UBC7 116 aa12.4□□□□□ -0.43
VAMP4-201ENST00000236192 A0A0B4J203 849 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 RRN3P2A6NIE6 340 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 BNIP3LO60238 219 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 RGS9O75916 674 aaPredicted RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 SCG5P05408 212 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 FGF4P08620 206 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 IL3P08700 152 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 RD3LP0DJH9 198 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 ASPAP45381 313 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 EEF1A1P68104 462 aaKnown RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 EEF1A2Q05639 463 aaKnown RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 TTLL4Q14679 1199 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 GFOD2Q3B7J2 385 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 EEF1A1P5Q5VTE0 462 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 FIP1L1Q6UN15 594 aaKnown RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF730Q6ZMV8 503 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 COPS5Q92905 334 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 ESAMQ96AP7 390 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 SLC12A8A0AV02 714 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 CACNG3O60359 315 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 MT-CYBP00156 380 aaPredicted RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 IFNA6P05013 189 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 EFNA1P20827 205 aaPredicted RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 KDELR2P33947 212 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 MLLT11Q13015 90 aaPredicted RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 DCAF15Q66K64 600 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 MARC2Q969Z3 335 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 SENP8Q96LD8 212 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 WDR83Q9BRX9 315 aaKnown RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 YIPF4Q9BSR8 244 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 B3GNT4Q9C0J1 378 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 METTL8Q9H825 291 aaKnown RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 ZSCAN32Q9NX65 697 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF639Q9UID6 485 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 FARSAQ9Y285 508 aaKnown RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 MEMO1Q9Y316 297 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 CDH10Q9Y6N8 788 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 DIP2BQ9P265 1576 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 PHRF1Q9P1Y6 1649 aaKnown RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 SH3BP2P78314 561 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 KIAA1161Q6NSJ0 714 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 ARL9Q6T311 187 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 ADGRF3Q8IZF5 1079 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 NSMAFQ92636 917 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 LINC00052Q96N35 136 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 RPRD1AQ96P16 312 aaPredicted RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 PDCD2LQ9BRP1 358 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 DOHHQ9BU89 302 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 PDGFDQ9GZP0 370 aaPredicted RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 MFSD1Q9H3U5 465 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 SEC14L3Q9UDX4 400 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 A0A0A6YYJ9 748 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 INHAP05111 366 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 GSTM3P21266 225 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 RBMS1P29558 406 aaKnown RBP12.39□□□□□ -0.43
VAMP4-201ENST00000236192 NUMBP49757 651 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 ZNF674Q2M3X9 581 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 CRB2Q5IJ48 1285 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 GPR139Q6DWJ6 353 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 OR10H4Q8NGA5 316 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 NPAS1Q99742 590 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 SRRQ9GZT4 340 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 ZFP57Q9NU63 452 aa12.39□□□□□ -0.43
VAMP4-201ENST00000236192 MRTO4Q9UKD2 239 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms