RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 C18orf63Q68DL7 685 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 PDSS2Q86YH6 399 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 MAPKAP1Q9BPZ7 522 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 BHLHE41Q9C0J9 482 aaPredicted RBP17.62■□□□□ 0.41
SNX17-201ENST00000233575 PIF1Q9H611 641 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 MN1Q10571 1320 aaPredicted RBP17.62■□□□□ 0.41
SNX17-201ENST00000233575 LNP1A1A4G5 178 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 KHNYNO15037 678 aaKnown RBP17.62■□□□□ 0.41
SNX17-201ENST00000233575 ZSCAN9O15535 394 aaPredicted RBP17.62■□□□□ 0.41
SNX17-201ENST00000233575 MED26O95402 600 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 ALOX12P18054 663 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 SOX11P35716 441 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 TSFMP43897 325 aaKnown RBP17.62■□□□□ 0.41
SNX17-201ENST00000233575 TGM3Q08188 693 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 SUZ12Q15022 739 aaKnown RBP17.62■□□□□ 0.41
SNX17-201ENST00000233575 ZC3H12BQ5HYM0 836 aaKnown RBP17.62■□□□□ 0.41
SNX17-201ENST00000233575 PLA2G2CQ5R387 149 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 IFNEQ86WN2 208 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 PLXDC1Q8IUK5 500 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 CLEC4FQ8N1N0 589 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 C10orf111Q8N326 155 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 ARHGEF39Q8N4T4 335 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 HIPK4Q8NE63 616 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 KLHL6Q8WZ60 621 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 MTERF3Q96E29 417 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 CD180Q99467 661 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 EPB41L1Q9H4G0 881 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 SLAMF7Q9NQ25 335 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 L3MBTL1Q9Y468 752 aa17.62■□□□□ 0.41
SNX17-201ENST00000233575 CACNA1HO95180 2353 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 A0A1W2PQM1 296 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 ERN1O75460 977 aaKnown RBP17.61■□□□□ 0.41
SNX17-201ENST00000233575 ZBTB11O95625 1053 aaPredicted RBP17.61■□□□□ 0.41
SNX17-201ENST00000233575 AIFM1O95831 613 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 C6orf47O95873 294 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 RPL3P39023 403 aaKnown RBP17.61■□□□□ 0.41
SNX17-201ENST00000233575 ACTR3P61158 418 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 TRA2BP62995 288 aaKnown RBP17.61■□□□□ 0.41
SNX17-201ENST00000233575 SLC14A1Q13336 389 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 RUNDC3AQ59EK9 446 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 FAM47BQ8NA70 645 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 EXOSC8Q96B26 276 aaKnown RBP17.61■□□□□ 0.41
SNX17-201ENST00000233575 CCDC115Q96NT0 180 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 PDE7BQ9NP56 450 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 ATAD3AQ9NVI7 634 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 WBP11Q9Y2W2 641 aaKnown RBP17.61■□□□□ 0.41
SNX17-201ENST00000233575 PCDHGA5Q9Y5G8 931 aa17.61■□□□□ 0.41
SNX17-201ENST00000233575 RNASET2O00584 256 aaKnown RBP17.6■□□□□ 0.41
SNX17-201ENST00000233575 PGRMC2O15173 223 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 DNAJA2O60884 412 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 ANP32DO95626 131 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 ABCB1P08183 1280 aaPredicted RBP17.6■□□□□ 0.41
SNX17-201ENST00000233575 PNLIPP16233 465 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 HBA1P69905 142 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 CCL7P80098 99 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 LIPEQ05469 1076 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 RUNX2Q13950 521 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 CCNIQ14094 377 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 ZNF574Q6ZN55 896 aaPredicted RBP17.6■□□□□ 0.41
SNX17-201ENST00000233575 ZNF621Q6ZSS3 439 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 ABHD13Q7L211 337 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 ZNF655Q8N720 491 aaPredicted RBP17.6■□□□□ 0.41
SNX17-201ENST00000233575 OR5T3Q8NGG3 340 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 BTNL2Q9UIR0 455 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 RALGAPA1Q6GYQ0 2036 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 URADA6NGE7 173 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 PRR33A8MZF0 331 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 ACOT8O14734 319 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 GSK3BP49841 420 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 GAB1Q13480 694 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 PRTGQ2VWP7 1150 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 PROX2Q3B8N5 592 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 ANXA8L1Q5VT79 327 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 WDR74Q6RFH5 385 aaPredicted RBP17.6■□□□□ 0.41
SNX17-201ENST00000233575 OR8J3Q8NGG0 315 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 GBP5Q96PP8 586 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 CPPED1Q9BRF8 314 aaPredicted RBP17.6■□□□□ 0.41
SNX17-201ENST00000233575 ALG2Q9H553 416 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 SUCOQ9UBS9 1254 aaKnown RBP17.6■□□□□ 0.41
SNX17-201ENST00000233575 RAB23Q9ULC3 237 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 NAALAD2Q9Y3Q0 740 aa17.6■□□□□ 0.41
SNX17-201ENST00000233575 SCN2AQ99250 2005 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 A0A1W2PS29 197 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 PROM1O43490 865 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 SRPX2O60687 465 aaPredicted RBP17.59■□□□□ 0.41
SNX17-201ENST00000233575 ATP6V1G2O95670 118 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 RPLP0P05388 317 aaKnown RBP17.59■□□□□ 0.41
SNX17-201ENST00000233575 GSTM5P46439 218 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 TRPC1P48995 793 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 TRIM25Q14258 630 aaKnown RBP17.59■□□□□ 0.41
SNX17-201ENST00000233575 MANEAQ5SRI9 462 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 VPS37AQ8NEZ2 397 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 OR6C4Q8NGE1 309 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 OR4A15Q8NGL6 344 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 SERINC2Q96SA4 455 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 CSF3RQ99062 836 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 THUMPD3Q9BV44 507 aaKnown RBP17.59■□□□□ 0.41
SNX17-201ENST00000233575 KCMF1Q9P0J7 381 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 EGFL7Q9UHF1 273 aa17.59■□□□□ 0.41
SNX17-201ENST00000233575 PLCL2Q9UPR0 1127 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms