RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 APLFQ8IW19 511 aaPredicted RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 CACTIN-AS1Q8N1I8 211 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 UBE2J2Q8N2K1 259 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 METTL2AQ96IZ6 378 aaKnown RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 DCBLD2Q96PD2 775 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 INSM2Q96T92 566 aaPredicted RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 TBC1D10AQ9BXI6 508 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 SERHL2Q9H4I8 314 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 TIMMDC1Q9NPL8 285 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 SERHLQ9NQF3 203 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 BATF3Q9NR55 127 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 CUTCQ9NTM9 273 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 TNFRSF10AO00220 468 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 RCBTB2O95199 551 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 TNFAIP8O95379 198 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 C1orf105O95561 183 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 SERPINA1P01009 418 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 IGLV3-25P01717 112 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 HMGN1P05114 100 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 F7P08709 466 aaPredicted RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 TCN2P20062 427 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 CDKN1CP49918 316 aaPredicted RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 MAZP56270 477 aaKnown RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 FADDQ13158 208 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 KRR1Q13601 381 aaKnown RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 LASP1Q14847 261 aaKnown RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 SMAD2Q15796 467 aaKnown RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 NPTX1Q15818 432 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 DEFB110Q30KQ9 67 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 LIN52Q52LA3 116 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 NANOGNBQ7Z5D8 188 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 SPPL2CQ8IUH8 684 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 GALNT15Q8N3T1 639 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 TOR1AIP2Q8NFQ8 470 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 PYDC1Q8WXC3 89 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 ZNF707Q96C28 371 aaPredicted RBP7.65□□□□□ -1.19
NANOG-201ENST00000229307 L3HYPDHQ96EM0 354 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 IFT27Q9BW83 186 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 TPT1P8Q9HAU6 139 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 IKZF2Q9UKS7 526 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 MAU2Q9Y6X3 613 aa7.65□□□□□ -1.19
NANOG-201ENST00000229307 NSG1A0A0A6YYJ2 146 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 FAM25AB3EWG3 89 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 FAM25CB3EWG5 89 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 FAM25GB3EWG6 89 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 SEMA3DO95025 777 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 CTSKP43235 329 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 ST13P50502 369 aaKnown RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 CDH12P55289 794 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 TRAP1Q12931 704 aaKnown RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 MZT2AQ6P582 158 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 CEP97Q8IW35 865 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 IL17RCQ8NAC3 791 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 SMRP1Q8NCR6 262 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 IFI44Q8TCB0 444 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 FUBP1Q96AE4 644 aaKnown RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 RHBDF1Q96CC6 855 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 PDLIM5Q96HC4 596 aaKnown RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 ELF4Q99607 663 aaPredicted RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 THSD1Q9NS62 852 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 ARL8BQ9NVJ2 186 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 EFCAB10A6NFE3 127 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 GRXCR2A6NFK2 248 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 GLOD5A6NK44 160 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 SMNDC1O75940 238 aaKnown RBP eCLIP7.64□□□□□ -1.19
NANOG-201ENST00000229307 PGM3O95394 542 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 OPRD1P41143 372 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 DCDP81605 110 aaKnown RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 TRNP1Q6NT89 227 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 REEP3Q6NUK4 255 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 TMEM154Q6P9G4 183 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 SYVN1Q86TM6 617 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 GRHL3Q8TE85 626 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 CLPTM1LQ96KA5 538 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 IP6K3Q96PC2 410 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 SHISA7A6NL88 538 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 PRR23D1E9PI22 279 aaPredicted RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 RGS5O15539 181 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 RFPL1O75677 317 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 KRT36O76013 467 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 FARS2O95363 451 aaKnown RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 GBAP04062 536 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 PABPC4LP0CB38 370 aaKnown RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 PRR23D2P0DMB1 279 aaPredicted RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 CD46P15529 392 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 MAGP20916 626 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 ACSL1P33121 698 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 ARFIP1P53367 373 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 MRPL49Q13405 166 aaKnown RBP7.64□□□□□ -1.19
NANOG-201ENST00000229307 UNC50Q53HI1 259 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 TMEM196Q5HYL7 178 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 EPGNQ6UW88 154 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 ABRAXAS1Q6UWZ7 409 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 RINLQ6ZS11 566 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 RASGEF1AQ8N9B8 481 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 ZNF671Q8TAW3 534 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 GAB3Q8WWW8 586 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 DIO2Q92813 273 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 SEMA6CQ9H3T2 930 aa7.64□□□□□ -1.19
NANOG-201ENST00000229307 ELL3Q9HB65 397 aaPredicted RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms