RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ZNF614Q8N883 585 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 OR52E4Q8NGH9 312 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 SMPDL3AQ92484 453 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 DNASE1L2Q92874 299 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 C17orf62Q9BQA9 187 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 SPATA5L1Q9BVQ7 753 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 SLC6A16Q9GZN6 736 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 C11orf49Q9H6J7 331 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 PHPT1Q9NRX4 125 aaPredicted RBP14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 KCNK6Q9Y257 313 aa14.31□□□□□ -0.12
UBE2D4-201ENST00000222402 IGLV3-16A0A075B6K0 115 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 TRBV23OR9-2A0A075B6M9 112 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 TLR4O00206 839 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 SNPHO15079 494 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 MPZL2O60487 215 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 GUCY1B2O75343 617 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 UQCRC2P22695 453 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 AZGP1P25311 298 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 MMP12P39900 470 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 XKP51811 444 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 UBE3AQ05086 875 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 AQP6Q13520 282 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 ELAVL3Q14576 367 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 SNAPC1Q16533 368 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 ERN2Q76MJ5 926 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 C16orf62Q7Z3J2 963 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 NRSN1Q8IZ57 195 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 OR56A3Q8NH54 315 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 WDR20Q8TBZ3 569 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 CXorf40BQ96DE9 158 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 TMPRSS11EQ9UL52 423 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 KCNE1BA0A087WTH5 132 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 K7ESM1 405 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 ADRB3P13945 408 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 CEBPBP17676 345 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 PSMA1P25786 263 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 PIK3CBP42338 1070 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 NCBP2P52298 156 aaKnown RBP eCLIP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 DCDC1P59894 354 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 SLC35A2P78381 396 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 TAP2Q03519 686 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 MTAPQ13126 283 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 ADPRMQ3LIE5 342 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 BHLHB9Q6PI77 547 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 ARMCX6Q7L4S7 300 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 RGMAQ96B86 450 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 METTL2AQ96IZ6 378 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 MAPKAP1Q9BPZ7 522 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 C19orf43Q9BQ61 176 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 TRMT61BQ9BVS5 477 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 UCK2Q9BZX2 261 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 ZBTB20Q9HC78 741 aaPredicted RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 CRNNQ9UBG3 495 aaPredicted RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 LYVE1Q9Y5Y7 322 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 CLCA1A8K7I4 914 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 FEN1P39748 380 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 MICAQ29983 383 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 RSBN1Q5VWQ0 802 aaPredicted RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 SDE2Q6IQ49 451 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 MRPL43Q8N983 215 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 SMAD5Q99717 465 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 POLR2J2Q9GZM3 115 aaKnown RBP14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 VWA8A3KMH1 1905 aa14.3□□□□□ -0.12
UBE2D4-201ENST00000222402 TRBV5-3A0A0A0MS03 114 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 PCDH17O14917 1159 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 CAPN5O15484 640 aaPredicted RBP14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 LATO43561 262 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 NPPBP16860 134 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 ZNF8P17098 575 aaPredicted RBP14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 GGT2P36268 569 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 TAS2R41P59536 307 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 FXNQ16595 210 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 CHTF18Q8WVB6 975 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 DACT3Q96B18 629 aaPredicted RBP14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 RHBGQ9H310 441 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 NEUROD4Q9HD90 331 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 SSR3Q9UNL2 185 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 ENPP4Q9Y6X5 453 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 SLC5A10A0PJK1 596 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 TRIM64CA6NLI5 447 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 AGAP14A8MT82 685 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 GREM1O60565 184 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 PAK4O96013 591 aaPredicted RBP14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 TIMP1P01033 207 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 CKMT1AP12532 417 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 IL1RNP18510 177 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 TPTEP56180 551 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 TUBA1BP68363 451 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 TGM3Q08188 693 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 ZNF385BQ569K4 471 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 DHRS4L2Q6PKH6 230 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 TUBA1AQ71U36 451 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 C6orf120Q7Z4R8 191 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 NLGN4XQ8N0W4 816 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 TMEM19Q96HH6 336 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 DSN1Q9H410 356 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 GIN1Q9NXP7 522 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 PTPRDP23468 1912 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 MYO10Q9HD67 2058 aa14.29□□□□□ -0.12
UBE2D4-201ENST00000222402 ERI3O43414 337 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms