RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 ISCA2Q86U28 154 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 STX19Q8N4C7 294 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 FAM181AQ8N9Y4 354 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 DUSP18Q8NEJ0 188 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 OR11H4Q8NGC9 324 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 SLC13A3Q8WWT9 602 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ZC3HAV1LQ96H79 300 aaKnown RBP13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF285Q96NJ3 590 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ZBTB18Q99592 522 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 SPON2Q9BUD6 331 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF768Q9H5H4 540 aaKnown RBP13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ALG9Q9H6U8 611 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ERVK-19Q9WJR5 959 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 ENTPD4Q9Y227 616 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 PKP3Q9Y446 797 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 KLK4Q9Y5K2 254 aa13.07□□□□□ -0.32
GABPB1-201ENST00000220429 A0A096LPI6 279 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 TRBV23-1A0A0A0MS06 115 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 TTLL8A6PVC2 850 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 PCDHGA12O60330 932 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 HPGDSO60760 199 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 MMP20O60882 483 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 GPX5O75715 221 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 RPP40O75818 363 aaKnown RBP13.06□□□□□ -0.32
GABPB1-201ENST00000220429 PRSS56P0CW18 603 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 HLA-EP13747 358 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 HMGA1P17096 107 aaKnown RBP13.06□□□□□ -0.32
GABPB1-201ENST00000220429 FDXRP22570 491 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 IGFBP5P24593 272 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 C21orf33P30042 268 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-201ENST00000220429 SLC11A2P49281 568 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 CLDN20P56880 219 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 HSD17B7P56937 341 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 PSPHP78330 225 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 HSF2Q03933 536 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 C2orf80Q0P641 193 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 C21orf62-AS1Q17RA5 79 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 FAM219BQ5XKK7 198 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 MACC1Q6ZN28 852 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 GPR155Q7Z3F1 870 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 DTWD1Q8N5C7 304 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 GPR150Q8NGU9 434 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF675Q8TD23 568 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 NSMAFQ92636 917 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 TRMT2BQ96GJ1 504 aaKnown RBP13.06□□□□□ -0.32
GABPB1-201ENST00000220429 EXOC2Q96KP1 924 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 COPS4Q9BT78 406 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 MND1Q9BWT6 205 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 AKTIPQ9H8T0 292 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 GKN1Q9NS71 199 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 NDRG3Q9UGV2 375 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 SLC6A14Q9UN76 642 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 LGALS8O00214 317 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 PQBP1O60828 265 aaKnown RBP13.06□□□□□ -0.32
GABPB1-201ENST00000220429 SLC43A1O75387 559 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 GNRH1P01148 92 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 RNF224P0DH78 156 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 SSTR2P30874 369 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 DCDC1P59894 354 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 ELP6Q0PNE2 266 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 TP53BP2Q13625 1128 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 HECTD3Q5T447 861 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 LCN1P1Q5VSP4 162 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 BHLHB9Q6PI77 547 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 C12orf40Q86WS4 652 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 FAM86B1Q8N7N1 296 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 CDYL2Q8N8U2 506 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 UPRTQ96BW1 309 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 C3orf30Q96M34 536 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 CARS2Q9HA77 564 aaKnown RBP13.06□□□□□ -0.32
GABPB1-201ENST00000220429 RASSF1Q9NS23 344 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 ZNF275Q9NSD4 429 aaPredicted RBP13.06□□□□□ -0.32
GABPB1-201ENST00000220429 RBFOX1Q9NWB1 397 aaKnown RBP13.06□□□□□ -0.32
GABPB1-201ENST00000220429 NLKQ9UBE8 527 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 ERVW-1Q9UQF0 538 aa13.06□□□□□ -0.32
GABPB1-201ENST00000220429 KDELR3O43731 214 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 PLOD3O60568 738 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 STC2O76061 302 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 PFKLP17858 780 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 TSPAN7P41732 249 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 CCL23P55773 120 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 FGL2Q14314 439 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 PAN3Q58A45 887 aaKnown RBP13.05□□□□□ -0.32
GABPB1-201ENST00000220429 CLEC6AQ6EIG7 209 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 MRNIPQ6NTE8 343 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 BLOC1S3Q6QNY0 202 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 SUSD1Q6UWL2 747 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 ABI3BPQ7Z7G0 1075 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 ADHFE1Q8IWW8 467 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 OR4L1Q8NH43 312 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 WDR36Q8NI36 951 aaKnown RBP13.05□□□□□ -0.32
GABPB1-201ENST00000220429 WBP2Q969T9 261 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 ELP4Q96EB1 424 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 CDKN2AIPNLQ96HQ2 116 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 C10orf90Q96M02 699 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 SMIM14Q96QK8 99 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 MARVELD1Q9BSK0 173 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 GSTO2Q9H4Y5 243 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 SLC52A3Q9NQ40 469 aa13.05□□□□□ -0.32
GABPB1-201ENST00000220429 PTTG3PQ9NZH4 202 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms