RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TBC1D3GQ6DHY5 549 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TBC1D3CQ6IPX1 549 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 FAHD1Q6P587 224 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CEACAM20Q6UY09 585 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 EP400NLQ6ZTU2 488 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 ARMC8Q8IUR7 673 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TBC1D3Q8IZP1 549 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 SPARTQ8N0X7 666 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 MMP21Q8N119 569 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 OR52E1Q8NGJ3 308 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CNIH3Q8TBE1 160 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 GIPC3Q8TF64 312 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 RAB2BQ8WUD1 216 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 EXOSC8Q96B26 276 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TAMM41Q96BW9 452 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TM4SF18Q96CE8 201 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 ZNF764Q96H86 408 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 COG8Q96MW5 612 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 DOK1Q99704 481 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 GABRG3Q99928 467 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 DCUN1D5Q9BTE7 237 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 APOOQ9BUR5 198 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 ZNF717Q9BY31 904 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 BTBD1Q9H0C5 482 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 XKR8Q9H6D3 395 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CXorf36Q9H7Y0 433 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 FZD3Q9NPG1 666 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 EXD2Q9NVH0 621 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 NDUFAF4Q9P032 175 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 WARS2Q9UGM6 360 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 NCKAP1Q9Y2A7 1128 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 FAM32AQ9Y421 112 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 LYVE1Q9Y5Y7 322 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TICRRQ7Z2Z1 1910 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 MYO9BQ13459 2157 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 OR52A4PA6NMU1 304 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 PTGES3LE9PB15 166 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 M0QX08 132 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 RFXAPO00287 272 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 SEC14L2O76054 403 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TBX6O95947 436 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 NTSP30990 170 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 POLR2IP36954 125 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CLK3P49761 638 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 PLA2G16P53816 162 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TMBIM6P55061 237 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CDH12P55289 794 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CXCR4P61073 352 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 GRSF1Q12849 480 aaKnown RBP eCLIP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 SFSWAPQ12872 951 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CDK5R2Q13319 367 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TMEM35AQ53FP2 167 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TMEM196Q5HYL7 178 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CRB2Q5IJ48 1285 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 AP1ARQ63HQ0 302 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 SAXO2Q658L1 398 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 OR4C11Q6IEV9 310 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 REEP3Q6NUK4 255 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 SZRD1Q7Z422 152 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TSPYL5Q86VY4 417 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 ADGRF3Q8IZF5 1079 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 SVOPQ8N4V2 548 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 OR10G2Q8NGC3 310 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 FBLIM1Q8WUP2 373 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 NEURL3Q96EH8 262 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 OR2M4Q96R27 311 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 ZNF300Q96RE9 604 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 NRTNQ99748 197 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 RPP25Q9BUL9 199 aaKnown RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 TMEM121BQ9BXQ6 578 aaPredicted RBP7.87□□□□□ -1.15
VAMP3-201ENST00000054666 DGCR6LQ9BY27 220 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 ZNF556Q9HAH1 456 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CCNB1IP1Q9NPC3 277 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 ZSCAN32Q9NX65 697 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 ENOPH1Q9UHY7 261 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 RAB23Q9ULC3 237 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 COLEC10Q9Y6Z7 277 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 CHD9Q3L8U1 2897 aa7.87□□□□□ -1.15
VAMP3-201ENST00000054666 SLC31A1O15431 190 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 FAM20BO75063 409 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 GUCY1B2O75343 617 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 GCM2O75603 506 aaPredicted RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 KLF8O95600 359 aaPredicted RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 IFNW1P05000 195 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 BCHEP06276 602 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 ACADMP11310 421 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 ANXA8P13928 327 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 DRD2P14416 443 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 CCNA2P20248 432 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 TNFRSF1BP20333 461 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 CMPK1P30085 196 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 GPC1P35052 558 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PCBP3P57721 371 aaKnown RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 EEF1A2Q05639 463 aaKnown RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 NPRL3Q12980 569 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 CLCA4Q14CN2 919 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 XAF1Q6GPH4 301 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 TNFAIP8L2Q6P589 184 aaPredicted RBP7.86□□□□□ -1.15
VAMP3-201ENST00000054666 B3GNT8Q7Z7M8 397 aa7.86□□□□□ -1.15
VAMP3-201ENST00000054666 PLD3Q8IV08 490 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms