RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SRPRAP08240 638 aaKnown RBP11.56□□□□□ -0.56
CHPF2-201ENST00000035307 CCDC159P0C7I6 412 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 HSD17B1P14061 328 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 ATP4BP51164 291 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 INHBCP55103 352 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 DSTNP60981 165 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 FOXM1Q08050 763 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 IRF4Q15306 451 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 LCN8Q6JVE9 175 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 OR4N5Q8IXE1 308 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 NAGSQ8N159 534 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 DPP10Q8N608 796 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 DTX3Q8N9I9 347 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 SLC5A11Q8WWX8 675 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 DTD2Q96FN9 168 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 SLC29A3Q9BZD2 475 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 GIN1Q9NXP7 522 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 PCDHGB3Q9Y5G1 929 aa11.56□□□□□ -0.56
CHPF2-201ENST00000035307 C2CD4DB7Z1M9 353 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 CLDN25C9JDP6 229 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 ACOT8O14734 319 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 DENRO43583 198 aaKnown RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 ASNA1O43681 348 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 AKT2P31751 481 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 RPL3P39023 403 aaKnown RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 SLC9A5Q14940 896 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 PYDC2Q56P42 97 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 CCL4L1Q8NHW4 92 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 ENKURQ8TC29 256 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 RERGQ96A58 199 aaPredicted RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 SLC35G5Q96KT7 338 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 FCRL4Q96PJ5 515 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 EFCAB11Q9BUY7 163 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF624Q9P2J8 865 aaPredicted RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF282Q9UDV7 671 aaPredicted RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 UTS2RQ9UKP6 389 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 PIKFYVEQ9Y2I7 2098 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 PVRP15151 417 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 RAB25P57735 213 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 OLR1P78380 273 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 NNATQ16517 81 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 MINDY4Q4G0A6 757 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 TSSK4Q6SA08 328 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 CROCCP3Q8IVE0 287 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 OR9A1PQ8NGU1 263 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 RAB2BQ8WUD1 216 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 ITFG2Q969R8 447 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 NEIL2Q969S2 332 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 FEVQ99581 238 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 GAL3ST1Q99999 423 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 KAT8Q9H7Z6 458 aaKnown RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 GMEB2Q9UKD1 530 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 BOLA2-SMG1P6H3BVE0 249 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 CASKO14936 926 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 ARHGEF9O43307 516 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 NR2F6P10588 404 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 BMP7P18075 431 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 KELP23276 732 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 CLCN7P51798 805 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 NCS1P62166 190 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 RPS21P63220 83 aaKnown RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 ZSWIM7Q19AV6 140 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 CRB2Q5IJ48 1285 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 RPS26P11Q5JNZ5 115 aaPredicted RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 WDR53Q7Z5U6 358 aaPredicted RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 CACTIN-AS1Q8N1I8 211 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 DEFB123Q8N688 67 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 DRAXINQ8NBI3 349 aaPredicted RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 OR7G3Q8NG95 312 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 POLR2J2Q9GZM3 115 aaKnown RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 MRPS30Q9NP92 439 aaKnown RBP11.55□□□□□ -0.56
CHPF2-201ENST00000035307 FAM118AQ9NWS6 357 aa11.55□□□□□ -0.56
CHPF2-201ENST00000035307 OR7A17O14581 309 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 ITGB7P26010 798 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 PCSK6P29122 969 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 OPRD1P41143 372 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 CDKN2CP42773 168 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 RPP38P78345 283 aaKnown RBP11.54□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF763Q0D2J5 394 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF846Q147U1 533 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 NEK5Q6P3R8 708 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 SBSNQ6UWP8 590 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 USP30Q70CQ3 517 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 OLIG3Q7RTU3 272 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 TMEM102Q8N9M5 508 aaPredicted RBP11.54□□□□□ -0.56
CHPF2-201ENST00000035307 OR9Q2Q8NGE9 314 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 GPR150Q8NGU9 434 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 DCSTAMPQ9H295 470 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 STARD5Q9NSY2 213 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 LSM1O15116 133 aaKnown RBP11.54□□□□□ -0.56
CHPF2-201ENST00000035307 TLX2O43763 284 aaPredicted RBP11.54□□□□□ -0.56
CHPF2-201ENST00000035307 GUCY1B2O75343 617 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 FPR1P21462 350 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 MMP12P39900 470 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 MAGEA12P43365 314 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 PGDP52209 483 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 EIF4EBP2Q13542 120 aaPredicted RBP11.54□□□□□ -0.56
CHPF2-201ENST00000035307 TYSND1Q2T9J0 566 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 CRIPAKQ8N1N5 446 aa11.54□□□□□ -0.56
CHPF2-201ENST00000035307 TCEANCQ8N8B7 351 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms