RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 PCDHGA7Q9Y5G6 932 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 SEC16AO15027 2179 aa11.67□□□□□ -0.54
LINC00339-213ENST00000642137 A0A0A6YYD5 115 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 ARHGAP10A1A4S6 786 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 CDRT15L2A8MXV6 281 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 SGK494L7N484 410 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 MEN1O00255 615 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 PCDH7O60245 1069 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 SNX3O60493 162 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 GUCY1B2O75343 617 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 EEDO75530 441 aaKnown RBP11.66□□□□□ -0.54
LINC00339-213ENST00000642137 DXOO77932 396 aaKnown RBP11.66□□□□□ -0.54
LINC00339-213ENST00000642137 STK17BO94768 372 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 DLGAP3O95886 979 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 FAM107AO95990 144 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 B3GALT4O96024 378 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 ANXA4P09525 319 aaPredicted RBP11.66□□□□□ -0.54
LINC00339-213ENST00000642137 FAM58BPP0C7Q3 252 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 AGXTP21549 392 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 CD82P27701 267 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 RPL38P63173 70 aaKnown RBP11.66□□□□□ -0.54
LINC00339-213ENST00000642137 IRX1P78414 480 aaPredicted RBP11.66□□□□□ -0.54
LINC00339-213ENST00000642137 MAP7Q14244 749 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 IL23RQ5VWK5 629 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 CYP20A1Q6UW02 462 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 MED25Q71SY5 747 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 SPATA21Q7Z572 469 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 C10orf82Q8WW14 230 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 TM4SF18Q96CE8 201 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 RILPQ96NA2 401 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 ULBP3Q9BZM4 244 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 FAM107BQ9H098 131 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 LYRM4Q9HD34 91 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 LYARQ9NX58 379 aaKnown RBP11.66□□□□□ -0.54
LINC00339-213ENST00000642137 MS4A12Q9NXJ0 267 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 NOP53Q9NZM5 478 aaKnown RBP11.66□□□□□ -0.54
LINC00339-213ENST00000642137 KCMF1Q9P0J7 381 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 GIMAP2Q9UG22 337 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 DAPP1Q9UN19 280 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 ASB4Q9Y574 426 aa11.66□□□□□ -0.54
LINC00339-213ENST00000642137 TRABD2BA6NFA1 517 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 UBDO15205 165 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 CHST10O43529 356 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 TMPRSS11DO60235 418 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 DNAJB6O75190 326 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 RDH16O75452 317 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 CCNYL3P0C7X3 344 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 BCKDHAP12694 445 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 IL10P22301 178 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 CERS1P27544 350 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 SLC5A2P31639 672 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 OR1D4P47884 311 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 MAPK12P53778 367 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 LIM2P55344 173 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 RAB38P57729 211 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 DSG2Q14126 1118 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 GSTA3Q16772 222 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 NKAIN1Q4KMZ8 207 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 C1orf189Q5VU69 101 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 C6orf15Q6UXA7 325 aaPredicted RBP11.65□□□□□ -0.54
LINC00339-213ENST00000642137 ZNF517Q6ZMY9 492 aaPredicted RBP11.65□□□□□ -0.54
LINC00339-213ENST00000642137 GPR180Q86V85 440 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 FAM9CQ8IZT9 166 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 CA13Q8N1Q1 262 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 DTWD1Q8N5C7 304 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 OR51Q1Q8NH59 317 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC00339-213ENST00000642137 C16orf78Q8WTQ4 265 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 COL26A1Q96A83 441 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 MAPKAP1Q9BPZ7 522 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 SCNM1Q9BWG6 230 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 PHF11Q9UIL8 331 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 KLK13Q9UKR3 277 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 PADI1Q9ULC6 663 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 MSRB2Q9Y3D2 182 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 MAP4K5Q9Y4K4 846 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 NEUROG3Q9Y4Z2 214 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 POLR3HQ9Y535 204 aaPredicted RBP11.65□□□□□ -0.54
LINC00339-213ENST00000642137 MAU2Q9Y6X3 613 aa11.65□□□□□ -0.54
LINC00339-213ENST00000642137 GNG14A0A1W2PPG7 69 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.64□□□□□ -0.55
LINC00339-213ENST00000642137 PROM1O43490 865 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 ALBP02768 609 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 GBAP04062 536 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 CD63P08962 238 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 ALDOCP09972 364 aaKnown RBP11.64□□□□□ -0.55
LINC00339-213ENST00000642137 SDC1P18827 310 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 ITGAXP20702 1163 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 FBLP22087 321 aaKnown RBP11.64□□□□□ -0.55
LINC00339-213ENST00000642137 TLX1P31314 330 aaPredicted RBP11.64□□□□□ -0.55
LINC00339-213ENST00000642137 ASMTP46597 345 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 ZNF763Q0D2J5 394 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 SF3A3Q12874 501 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00339-213ENST00000642137 OVCH1Q7RTY7 1134 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 TIPARPQ7Z3E1 657 aaKnown RBP11.64□□□□□ -0.55
LINC00339-213ENST00000642137 LIX1Q8N485 282 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 METTL27Q8N6F8 245 aaPredicted RBP11.64□□□□□ -0.55
LINC00339-213ENST00000642137 GALNT6Q8NCL4 622 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 OR5T3Q8NGG3 340 aa11.64□□□□□ -0.55
LINC00339-213ENST00000642137 ADAMTS18Q8TE60 1221 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms