RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	ARMC2	Q8NEN0	867 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	M1AP	Q8TC57	530 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	ADAMTS18	Q8TE60	1221 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	CMTM7	Q96FZ5	175 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	CNDP1	Q96KN2	507 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	KCNC2	Q96PR1	638 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	SERINC2	Q96SA4	455 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	MRPL57	Q9BQC6	102 aa	Known RBP	14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	MS4A8	Q9BY19	250 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	EPB41L4B	Q9H329	900 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	ACTR8	Q9H981	624 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	MAP10	Q9P2G4	905 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	FETUB	Q9UGM5	382 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	TEKT2	Q9UIF3	430 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	VPS4A	Q9UN37	437 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	MMACHC	Q9Y4U1	282 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	ZGRF1	Q86YA3	2104 aa		14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	SETX	Q7Z333	2677 aa	Known RBP	14.12	□□□□□ -0.15
PHGDH-231	ENST00000641939	IGKV3D-11	A0A0A0MRZ8	115 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	STX16-NPEPL1	H3BU86	382 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	STX16	O14662	325 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	UGDH	O60701	494 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	MYBL2	P10244	700 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	CERS1	P27544	350 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	EEF1D	P29692	281 aa	Known RBP	14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	ARG2	P78540	354 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	TMEM35A	Q53FP2	167 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	ABHD17B	Q5VST6	288 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	CHSY3	Q70JA7	882 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	CNPY4	Q8N129	248 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	CISD2	Q8N5K1	135 aa	Known RBP	14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	HAS2	Q92819	552 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	SNRNP40	Q96DI7	357 aa	Known RBP	14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	PHF21B	Q96EK2	531 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	MAGEB10	Q96LZ2	347 aa	Predicted RBP	14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	TBCD	Q9BTW9	1192 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	ROGDI	Q9GZN7	287 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	MRPL46	Q9H2W6	279 aa	Known RBP	14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	IPPK	Q9H8X2	491 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	MMP25	Q9NPA2	562 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	NECTIN3	Q9NQS3	549 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	PRDM7	Q9NQW5	492 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	PLA2G3	Q9NZ20	509 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	DAPP1	Q9UN19	280 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	MRPS33	Q9Y291	106 aa	Known RBP	14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	TSC22D4	Q9Y3Q8	395 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	PCDHGA11	Q9Y5H2	935 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	POLE	Q07864	2286 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	HECTD1	Q9ULT8	2610 aa		14.11	□□□□□ -0.15
PHGDH-231	ENST00000641939	IQANK1	A0A1B0GTG1	560 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	TCRBV16S1A1N1	A0A5B0	115 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939		A8MUI8	341 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939		H0YIV9	168 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	CLDN4	O14493	209 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	SH3BGRL	O75368	114 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	TGFB1	P01137	390 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	TNFRSF8	P28908	595 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	PIK3CB	P42338	1070 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	TSFM	P43897	325 aa	Known RBP	14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	LIM2	P55344	173 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	ZNF33B	Q06732	778 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	DDX39B	Q13838	428 aa	Known RBP	14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	RCN2	Q14257	317 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	H3F3C	Q6NXT2	135 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	UBE3D	Q7Z6J8	389 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	ZNF595	Q8IYB9	648 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	CYP4X1	Q8N118	509 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	L3MBTL4	Q8NA19	623 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	FAM47B	Q8NA70	645 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	CATSPER1	Q8NEC5	780 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	HUS1B	Q8NHY5	278 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	REPS1	Q96D71	796 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	C19orf60	Q96EN9	201 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	ZNF354B	Q96LW1	612 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	CCDC77	Q9BR77	488 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	SLC29A3	Q9BZD2	475 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	RNF32	Q9H0A6	362 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	NOL11	Q9H8H0	719 aa	Known RBP	14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	KCNK13	Q9HB14	408 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	LYRM4	Q9HD34	91 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	PRTFDC1	Q9NRG1	225 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	ASF1B	Q9NVP2	202 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	SPTAN1	Q13813	2472 aa	Known RBP	14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	COL12A1	Q99715	3063 aa		14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	SPTBN1	Q01082	2364 aa	Known RBP	14.1	□□□□□ -0.15
PHGDH-231	ENST00000641939	SAGE2P	A6NJ88	616 aa		14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	WDPCP	O95876	746 aa		14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	ATP5A1	P25705	553 aa	Known RBP	14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	ARL1	P40616	181 aa	Predicted RBP	14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	SSR2	P43308	183 aa		14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	TNFSF10	P50591	281 aa		14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	CCNG1	P51959	295 aa		14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	HNRNPF	P52597	415 aa	Known RBP	14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	HSD17B7	P56937	341 aa		14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	SLC26A5	P58743	744 aa		14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	PHEX	P78562	749 aa		14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	SLC13A2	Q13183	592 aa		14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	CPSF6	Q16630	551 aa	Known RBP eCLIP	14.09	□□□□□ -0.15
PHGDH-231	ENST00000641939	AP5B1	Q2VPB7	878 aa		14.09	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms