RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ITCHQ96J02 903 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 FCRL4Q96PJ5 515 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 PRPF18Q99633 342 aaKnown RBP12.47□□□□□ -0.41
PHGDH-221ENST00000641573 SEMA6CQ9H3T2 930 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 REEP4Q9H6H4 257 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 RMND5AQ9H871 391 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 LHX9Q9NQ69 397 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 CMTM6Q9NX76 183 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 ABCD2Q9UBJ2 740 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 ATP6V1HQ9UI12 483 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 ADAM29Q9UKF5 820 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 PILRAQ9UKJ1 303 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 EXO1Q9UQ84 846 aaKnown RBP12.47□□□□□ -0.41
PHGDH-221ENST00000641573 POMPQ9Y244 141 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 RNF215Q9Y6U7 377 aa12.47□□□□□ -0.41
PHGDH-221ENST00000641573 TDRD6O60522 2096 aaKnown RBP12.47□□□□□ -0.41
PHGDH-221ENST00000641573 ARHGEF17Q96PE2 2063 aaPredicted RBP12.47□□□□□ -0.41
PHGDH-221ENST00000641573 C15orf38-AP3S2A0A0A6YYH1 394 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 A0A0G2JN53 185 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 GABRR3A8MPY1 467 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 NME4O00746 187 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 ERI3O43414 337 aaKnown RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 PRAMEF10O60809 474 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 ENTPD5O75356 428 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 ATP6V1G2O95670 118 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 IL3P08700 152 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 LAMP1P11279 417 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 PIM1P11309 404 aaPredicted RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 CDH3P22223 829 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 RPL3P39023 403 aaKnown RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 SSR2P43308 183 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 PPM1FP49593 454 aaPredicted RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 ARFIP1P53367 373 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 MAPK12P53778 367 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 EPHA4P54764 986 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 WNT3P56703 355 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 STXBP1P61764 594 aaKnown RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 TGM3Q08188 693 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 HLA-BQ31612 363 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 NANOGP8Q6NSW7 305 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 IRGCQ6NXR0 463 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 ABHD17CQ6PCB6 329 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 IKBIPQ70UQ0 350 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 R3HCC1LQ7Z5L2 792 aaKnown RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 CAMKMTQ7Z624 323 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 ARPINQ7Z6K5 226 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 ANKRD46Q86W74 232 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 SLC35F3Q8IY50 421 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 OR2L5Q8NG80 312 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 OR8J2Q8NGG1 315 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 DNAJB8Q8NHS0 232 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 TMEM125Q96AQ2 219 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 TM4SF18Q96CE8 201 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 COQ8BQ96D53 544 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 TM4SF19Q96DZ7 209 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 TEFMQ96QE5 360 aaKnown RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 OR2A5Q96R48 311 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 CGREF1Q99674 301 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 ZFYVE21Q9BQ24 234 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 C17orf62Q9BQA9 187 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 DUSP26Q9BV47 211 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 SLC6A16Q9GZN6 736 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 DDX31Q9H8H2 851 aaKnown RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 NANOGQ9H9S0 305 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 IL21RQ9HBE5 538 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 SERHLQ9NQF3 203 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 FAM120CQ9NX05 1096 aaKnown RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 LRIT1Q9P2V4 623 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 CD300AQ9UGN4 299 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 MAN2B2Q9Y2E5 1009 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 BTBD3Q9Y2F9 522 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 WBP11Q9Y2W2 641 aaKnown RBP12.46□□□□□ -0.41
PHGDH-221ENST00000641573 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 PCDHA9Q9Y5H5 950 aa12.46□□□□□ -0.41
PHGDH-221ENST00000641573 URB1O60287 2271 aaKnown RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 A0A087WV48 116 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 A0A096LPI6 279 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 A0A0A6YYD5 115 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 PRORSD1PA6NEY8 169 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 C4orf51C9J302 202 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 MAP3K7O43318 606 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 TMPRSS11DO60235 418 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 DFNA5O60443 496 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 ERN1O75460 977 aaKnown RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 B3GALT4O96024 378 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 FURINP09958 794 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 PLA2G2AP14555 144 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 ST6GAL1P15907 406 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 GSTM5P46439 218 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 ACTR3P61158 418 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 TRA2BP62995 288 aaKnown RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 MC1RQ01726 317 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 PDE7AQ13946 482 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 ANXA8L1Q5VT79 327 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 TRIM40Q6P9F5 258 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 DNAJC14Q6Y2X3 702 aaPredicted RBP12.45□□□□□ -0.42
PHGDH-221ENST00000641573 ZNF793Q6ZN11 406 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 RNF44Q7L0R7 432 aa12.45□□□□□ -0.42
PHGDH-221ENST00000641573 TMPRSS7Q7RTY8 843 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms