RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 NME2P1O60361 137 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 CLDN14O95500 239 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 SP1P08047 785 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 CD1EP15812 388 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 HOXB4P17483 251 aaPredicted RBP13.65□□□□□ -0.22
SRRT-219ENST00000641476 NME2P22392 152 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 GSTM2P28161 218 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 MLF1P58340 268 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 BTN3A2P78410 334 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 CALCOCO2Q13137 446 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 C3AR1Q16581 482 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 FBXO48Q5FWF7 155 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 ADNP2Q6IQ32 1131 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 SIAH3Q8IW03 269 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 SCUBE1Q8IWY4 988 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 MMP21Q8N119 569 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 KRT78Q8N1N4 520 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 TCAIMQ8N3R3 496 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 SPATA6LQ8N4H0 392 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 FAM98AQ8NCA5 519 aaKnown RBP13.65□□□□□ -0.22
SRRT-219ENST00000641476 NFAM1Q8NET5 270 aaPredicted RBP13.65□□□□□ -0.22
SRRT-219ENST00000641476 THAP3Q8WTV1 239 aaPredicted RBP13.65□□□□□ -0.22
SRRT-219ENST00000641476 ZNF592Q92610 1267 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 CDKL2Q92772 493 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 MS4A6EQ96DS6 147 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 TSPAN17Q96FV3 270 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 CPNE1Q99829 537 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 MCCC2Q9HCC0 563 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 DNAJC11Q9NVH1 559 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 GPRC5BQ9NZH0 403 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 WHRNQ9P202 907 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 TXNDC16Q9P2K2 825 aa13.65□□□□□ -0.22
SRRT-219ENST00000641476 TRBV11-1A0A0K0K1C0 115 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 LRIT2A6NDA9 550 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 FAM187AA6NFU0 413 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 FAM159BA6NKW6 160 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 A8MUA0 341 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 ESPNB1AK53 854 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 NPIPA5E9PKD4 350 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 TGFBR3LH3BV60 316 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 CDK2AP1O14519 115 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 EIF3HO15372 352 aaKnown RBP eCLIP13.64□□□□□ -0.23
SRRT-219ENST00000641476 TAPBPO15533 448 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 PRAMEF4O60810 478 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 CLEC3AO75596 197 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 MYO1DO94832 1006 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 MLYCDO95822 493 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 TBX6O95947 436 aaPredicted RBP13.64□□□□□ -0.23
SRRT-219ENST00000641476 C1QAP02745 245 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 TUBB4AP04350 444 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 CCDC166P0CW27 439 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 CD1DP15813 335 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 ZNF24P17028 368 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 AGAP20933 346 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 GP5P40197 560 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 HSPA7P48741 367 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 HNRNPFP52597 415 aaKnown RBP13.64□□□□□ -0.23
SRRT-219ENST00000641476 RAB38P57729 211 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 C2orf54Q08AI8 447 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 TERF2Q15554 542 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 OR4D1Q15615 310 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 ZKSCAN8Q15776 578 aaPredicted RBP13.64□□□□□ -0.23
SRRT-219ENST00000641476 PRAMEF9Q5VWM5 478 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 SLC25A25Q6KCM7 469 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 VN1R5Q7Z5H4 357 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.64□□□□□ -0.23
SRRT-219ENST00000641476 ZNF227Q86WZ6 799 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 GPSM1Q86YR5 675 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 FAM47BQ8NA70 645 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 APCDD1LQ8NCL9 501 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 PDPRQ8NCN5 879 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 TMEM52Q8NDY8 209 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 B3GNT7Q8NFL0 401 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 ADAMTS18Q8TE60 1221 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 EXT2Q93063 718 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 SEC16BQ96JE7 1060 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 FAR2Q96K12 515 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 QRFPRQ96P65 431 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 ERP44Q9BS26 406 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 PITHD1Q9GZP4 211 aaPredicted RBP13.64□□□□□ -0.23
SRRT-219ENST00000641476 EHD1Q9H4M9 534 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 CNOT10Q9H9A5 744 aaKnown RBP13.64□□□□□ -0.23
SRRT-219ENST00000641476 GRHL1Q9NZI5 618 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 NPIPA1Q9UND3 350 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 CLDN16Q9Y5I7 305 aa13.64□□□□□ -0.23
SRRT-219ENST00000641476 A0A088AWK7 358 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 FCHO1O14526 889 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 B3GALT2O43825 422 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 ZNF500O60304 480 aaPredicted RBP13.63□□□□□ -0.23
SRRT-219ENST00000641476 H2AFYO75367 372 aaKnown RBP13.63□□□□□ -0.23
SRRT-219ENST00000641476 STMN1P16949 149 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 CD22P20273 847 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 ZNF10P21506 573 aaPredicted RBP13.63□□□□□ -0.23
SRRT-219ENST00000641476 CERS1P27544 350 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 PPP2R1BP30154 601 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 TRHRP34981 398 aaPredicted RBP13.63□□□□□ -0.23
SRRT-219ENST00000641476 GGT5P36269 586 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 GMPRP36959 345 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 CYB561P49447 251 aa13.63□□□□□ -0.23
SRRT-219ENST00000641476 ART1P52961 327 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms