RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 LRRC14BA6NHZ5 514 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 A8MT66 165 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 H3BQF6 201 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 B4GALT2O60909 372 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 MLYCDO95822 493 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 TGFB1P01137 390 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 SHBGP04278 402 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 SBK3P0C264 359 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 IMPDH1P20839 514 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 ATP5A1P25705 553 aaKnown RBP13.41□□□□□ -0.26
SDHD-209ENST00000640554 CRHR1P34998 444 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 ARL1P40616 181 aaPredicted RBP13.41□□□□□ -0.26
SDHD-209ENST00000640554 OR4D2P58180 307 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 OLR1P78380 273 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 Q0VFX4 171 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 MFAP5Q13361 173 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 RAPSNQ13702 412 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 RUNX2Q13950 521 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 TERF2Q15554 542 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 ZRSR2Q15696 482 aaKnown RBP13.41□□□□□ -0.26
SDHD-209ENST00000640554 CPSF6Q16630 551 aaKnown RBP eCLIP13.41□□□□□ -0.26
SDHD-209ENST00000640554 FRG2Q64ET8 278 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 OR4C11Q6IEV9 310 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 SH2D5Q6ZV89 423 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 HOMEZQ8IX15 550 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 ACOT4Q8N9L9 421 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 RDH11Q8TC12 318 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 ZNF483Q8TF39 744 aaPredicted RBP13.41□□□□□ -0.26
SDHD-209ENST00000640554 AENQ8WTP8 325 aaKnown RBP13.41□□□□□ -0.26
SDHD-209ENST00000640554 FRG2BQ96QU4 278 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 SERPINI1Q99574 410 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 SLAMF7Q9NQ25 335 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 DMRT3Q9NQL9 472 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 NMRK1Q9NWW6 199 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 AHSPQ9NZD4 102 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 B3GNT3Q9Y2A9 372 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 RNF11Q9Y3C5 154 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 ZNF462Q96JM2 2506 aa13.41□□□□□ -0.26
SDHD-209ENST00000640554 IGKV3D-11A0A0A0MRZ8 115 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 TCRBV16S1A1N1A0A5B0 115 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 C4orf51C9J302 202 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 GOLGA8RI6L899 631 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 OR7A17O14581 309 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 DLX3O60479 287 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 CTNSO60931 367 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 DNAJB6O75190 326 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 CDC123O75794 336 aaPredicted RBP13.4□□□□□ -0.26
SDHD-209ENST00000640554 SEMA3DO95025 777 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 B3GALT4O96024 378 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 HIST1H1TP22492 207 aaPredicted RBP13.4□□□□□ -0.26
SDHD-209ENST00000640554 TLX1P31314 330 aaPredicted RBP13.4□□□□□ -0.26
SDHD-209ENST00000640554 RAP1GDS1P52306 607 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 PRKAA2P54646 552 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 LIM2P55344 173 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 IFFO1Q0D2I5 559 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 IFT88Q13099 833 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 SFT2D3Q587I9 215 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 PAPD4Q6PIY7 484 aaKnown RBP13.4□□□□□ -0.26
SDHD-209ENST00000640554 Q6ZS92 163 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 UBE3DQ7Z6J8 389 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 ZCCHC7Q8N3Z6 543 aaKnown RBP13.4□□□□□ -0.26
SDHD-209ENST00000640554 MREGQ8N565 214 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 RBMXL3Q8N7X1 1067 aaKnown RBP13.4□□□□□ -0.26
SDHD-209ENST00000640554 WDR20Q8TBZ3 569 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 PSMF1Q92530 271 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 MTERF1Q99551 399 aaKnown RBP13.4□□□□□ -0.26
SDHD-209ENST00000640554 PARD6BQ9BYG5 372 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 RNF32Q9H0A6 362 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 ZBTB26Q9HCK0 441 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 MMP25Q9NPA2 562 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 PRTFDC1Q9NRG1 225 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 MID2Q9UJV3 735 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 SNX6Q9UNH7 406 aa13.4□□□□□ -0.26
SDHD-209ENST00000640554 A0A1W2PPM1 405 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 DYTNA2CJ06 578 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 CCDC151A5D8V7 595 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 TTLL8A6PVC2 850 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 CYR61O00622 381 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 COPEO14579 308 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 SEC24DO94855 1032 aaPredicted RBP13.39□□□□□ -0.27
SDHD-209ENST00000640554 SUPT7LO94864 414 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 SOX11P35716 441 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 SSR2P43308 183 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 SLCO1A2P46721 670 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 EFNA3P52797 238 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 TAS2R50P59544 299 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 TLE1Q04724 770 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 CLCQ05315 142 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 SLC18A2Q05940 514 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 ZNF33BQ06732 778 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 TRAF3Q13114 568 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 DDX39BQ13838 428 aaKnown RBP13.39□□□□□ -0.27
SDHD-209ENST00000640554 ERCC6LQ2NKX8 1250 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 BTBD16Q32M84 506 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 ZNF678Q5SXM1 525 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 SLC6A19Q695T7 634 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 TTC19Q6DKK2 380 aaPredicted RBP13.39□□□□□ -0.27
SDHD-209ENST00000640554 ADNP2Q6IQ32 1131 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 H3F3CQ6NXT2 135 aa13.39□□□□□ -0.27
SDHD-209ENST00000640554 LANCL3Q6ZV70 420 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms