RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 FOLR3P41439 243 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 EFNA3P52797 238 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 SKP1P63208 163 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 KLC1Q07866 573 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 TBL3Q12788 808 aaKnown RBP12.47□□□□□ -0.41
GTF3A-209ENST00000640289 UGT3A2Q3SY77 523 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 HSP90B2PQ58FF3 399 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 BROXQ5VW32 411 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 NIPAL1Q6NVV3 410 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 LAPTM4BQ86VI4 370 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 ACOT4Q8N9L9 421 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 CRELD1Q96HD1 420 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 SERINC2Q96SA4 455 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 MAPKAP1Q9BPZ7 522 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 MANSC1Q9H8J5 431 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 WDR54Q9H977 334 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 VPS29Q9UBQ0 182 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
GTF3A-209ENST00000640289 FER1L5A0AVI2 2057 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 FREM2Q5SZK8 3169 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 SERTM1A2A2V5 107 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 FAM227AF5H4B4 570 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 SNNO75324 88 aaPredicted RBP12.46□□□□□ -0.41
GTF3A-209ENST00000640289 SKAP2O75563 359 aaPredicted RBP12.46□□□□□ -0.41
GTF3A-209ENST00000640289 SEMA3DO95025 777 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 SCELO95171 688 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 FURINP09958 794 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 LINC00032P0C843 101 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 PRKAR1AP10644 381 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 TPP2P29144 1249 aaPredicted RBP12.46□□□□□ -0.41
GTF3A-209ENST00000640289 LIM2P55344 173 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 RAB38P57729 211 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 BTKQ06187 659 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 ZNF33BQ06732 778 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 MFSD4BQ5TF39 518 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 ATG16L1Q676U5 607 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 NUDT13Q86X67 352 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 METTL4Q8N3J2 472 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 C1orf52Q8N6N3 182 aaKnown RBP12.46□□□□□ -0.41
GTF3A-209ENST00000640289 GBP7Q8N8V2 638 aaPredicted RBP12.46□□□□□ -0.41
GTF3A-209ENST00000640289 FAM47BQ8NA70 645 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 OR2Y1Q8NGV0 311 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 RAB3IL1Q8TBN0 382 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 TWIST2Q8WVJ9 160 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 ZNF75CPQ92670 426 aaPredicted RBP12.46□□□□□ -0.41
GTF3A-209ENST00000640289 APIPQ96GX9 242 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 CSF3RQ99062 836 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 MESP1Q9BRJ9 268 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 NPLQ9BXD5 320 aaPredicted RBP12.46□□□□□ -0.41
GTF3A-209ENST00000640289 TGIF2Q9GZN2 237 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 ROGDIQ9GZN7 287 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 MED4Q9NPJ6 270 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 INTS9Q9NV88 658 aaKnown RBP12.46□□□□□ -0.41
GTF3A-209ENST00000640289 C14orf105Q9NVL8 296 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 NXT1Q9UKK6 140 aaKnown RBP12.46□□□□□ -0.41
GTF3A-209ENST00000640289 FBXW2Q9UKT8 454 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 DAPP1Q9UN19 280 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 PADI2Q9Y2J8 665 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 RAP2CQ9Y3L5 183 aa12.46□□□□□ -0.41
GTF3A-209ENST00000640289 CEP295Q9C0D2 2601 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 A0A0A6YYD5 115 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 CDC14CA4D256 554 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 ZNF891A8MT65 544 aaPredicted RBP12.45□□□□□ -0.42
GTF3A-209ENST00000640289 PIP5K1BO14986 540 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 TMPRSS11DO60235 418 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 B4GALT2O60909 372 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 CHEK2O96017 543 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 KLK1P06870 262 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 FHP07954 510 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 CD63P08962 238 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 RNH1P13489 461 aaKnown RBP12.45□□□□□ -0.42
GTF3A-209ENST00000640289 TSFMP43897 325 aaKnown RBP12.45□□□□□ -0.42
GTF3A-209ENST00000640289 HNRNPFP52597 415 aaKnown RBP12.45□□□□□ -0.42
GTF3A-209ENST00000640289 ARFIP1P53367 373 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 TMPRSS3P57727 454 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 CXADRP78310 365 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 SLAMF1Q13291 335 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 IMPG1Q17R60 797 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 MINDY4Q4G0A6 757 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 FAAH2Q6GMR7 532 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 C19orf48Q6RUI8 117 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 Q6ZSR9 355 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 COMMD6Q7Z4G1 85 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 TRIM46Q7Z4K8 759 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 TRIM42Q8IWZ5 723 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 DDIASQ8IXT1 998 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 ZCCHC7Q8N3Z6 543 aaKnown RBP12.45□□□□□ -0.42
GTF3A-209ENST00000640289 TMEM52Q8NDY8 209 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 OR2T11Q8NH01 316 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 CHTF18Q8WVB6 975 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 DYDC1Q8WWB3 177 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 TBC1D20Q96BZ9 403 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 CRB3Q9BUF7 120 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 FAM117AQ9C073 453 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 VN1R1Q9GZP7 353 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 ILKAPQ9H0C8 392 aaPredicted RBP12.45□□□□□ -0.42
GTF3A-209ENST00000640289 DDX31Q9H8H2 851 aaKnown RBP12.45□□□□□ -0.42
GTF3A-209ENST00000640289 CLK4Q9HAZ1 481 aaKnown RBP12.45□□□□□ -0.42
GTF3A-209ENST00000640289 LANCL2Q9NS86 450 aa12.45□□□□□ -0.42
GTF3A-209ENST00000640289 PNPOQ9NVS9 261 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms