RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 C12orf76Q8N812 135 aaPredicted RBP11.9□□□□□ -0.5
SPIN3-236ENST00000640131 KCT2Q8NC54 265 aa11.9□□□□□ -0.5
SPIN3-236ENST00000640131 STON2Q8WXE9 905 aa11.9□□□□□ -0.5
SPIN3-236ENST00000640131 SGTBQ96EQ0 304 aa11.9□□□□□ -0.5
SPIN3-236ENST00000640131 MAGEB10Q96LZ2 347 aaPredicted RBP11.9□□□□□ -0.5
SPIN3-236ENST00000640131 WRAP53Q9BUR4 548 aaKnown RBP11.9□□□□□ -0.5
SPIN3-236ENST00000640131 CERS4Q9HA82 394 aa11.9□□□□□ -0.5
SPIN3-236ENST00000640131 PCDHA9Q9Y5H5 950 aa11.9□□□□□ -0.5
SPIN3-236ENST00000640131 BBIP1A8MTZ0 92 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 MATN4O95460 622 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 OTCP00480 354 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 RHOP08100 348 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 FASP25445 335 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 RPP38P78345 283 aaKnown RBP11.9□□□□□ -0.51
SPIN3-236ENST00000640131 ADARB1P78563 741 aaKnown RBP11.9□□□□□ -0.51
SPIN3-236ENST00000640131 RGS1Q08116 209 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 TNK1Q13470 666 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 ZNF404Q494X3 552 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 SPANXN4Q5MJ08 99 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 FAM180BQ6P0A1 224 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 PRSS48Q7RTY5 328 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 SPATA19Q7Z5L4 167 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 GPAT4Q86UL3 456 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 P2RY8Q86VZ1 359 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 JAZF1Q86VZ6 243 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 SCRN2Q96FV2 425 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 TSSK3Q96PN8 268 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 NUSAP1Q9BXS6 441 aaKnown RBP11.9□□□□□ -0.51
SPIN3-236ENST00000640131 EBPLQ9BY08 206 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 HPF1Q9NWY4 346 aa11.9□□□□□ -0.51
SPIN3-236ENST00000640131 DOCK9Q9BZ29 2069 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 SYN1P17600 705 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 PSMA4P25789 261 aaKnown RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 PREPP48147 710 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 CCT3P49368 545 aaKnown RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 ZNF45Q02386 682 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 GRIK2Q13002 908 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 PRKG2Q13237 762 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 ZIK1Q3SY52 487 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 CARD16Q5EG05 197 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 LILRA6Q6PI73 481 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 LIX1LQ8IVB5 337 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 RGL4Q8IZJ4 473 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 ZNF557Q8N988 423 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 POF1BQ8WVV4 589 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 AHCYL2Q96HN2 611 aaKnown RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 KLHL15Q96M94 604 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 RNF145Q96MT1 663 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 HOPXQ9BPY8 73 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 GTPBP2Q9BX10 602 aaKnown RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 CD244Q9BZW8 370 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 MMP27Q9H306 513 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 IKZF5Q9H5V7 419 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 LEF1Q9UJU2 399 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 PDE10AQ9Y233 779 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 OARD1Q9Y530 152 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 PCDHGB6Q9Y5F9 930 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 MAGED1Q9Y5V3 778 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 SOCS5O75159 536 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 WDR47O94967 919 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 PSMA3P25788 255 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 PPM1AP35813 382 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 FLI1Q01543 452 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 PCBP2Q15366 365 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 TPRG1LQ5T0D9 272 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 OTUD3Q5T2D3 398 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 SUSD1Q6UWL2 747 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 SFTPA1Q8IWL2 248 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 FAM217AQ8IXS0 508 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 MINDY1Q8N5J2 469 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 CENPNQ96H22 339 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 C1QTNF3Q9BXJ4 246 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 C11orf49Q9H6J7 331 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 TRIM45Q9H8W5 580 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 AGPAT4Q9NRZ5 378 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 SLC6A13Q9NSD5 602 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 TDP1Q9NUW8 608 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 MBD2Q9UBB5 411 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 ABCD2Q9UBJ2 740 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.89□□□□□ -0.51
SPIN3-236ENST00000640131 UTS2RQ9UKP6 389 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 SLC22A14Q9Y267 594 aa11.89□□□□□ -0.51
SPIN3-236ENST00000640131 ULK1O75385 1050 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 TNFRSF21O75509 655 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 STK16O75716 305 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 LATS1O95835 1130 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 HLA-EP13747 358 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 EPB42P16452 691 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 TGFBR1P36897 503 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 RECQLP46063 649 aaPredicted RBP11.88□□□□□ -0.51
SPIN3-236ENST00000640131 GBX2P52951 348 aaPredicted RBP11.88□□□□□ -0.51
SPIN3-236ENST00000640131 SPATS1Q496A3 300 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 ADNP2Q6IQ32 1131 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 FAM86B1Q8N7N1 296 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 YIPF7Q8N8F6 280 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 OR2A12Q8NGT7 310 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 FBXO30Q8TB52 745 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 MCOLN3Q8TDD5 553 aa11.88□□□□□ -0.51
SPIN3-236ENST00000640131 HTATIP2Q9BUP3 242 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms